Gene
RNA
| Item | Value |
|---|---|
| gene id | G1353001 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 22674805 ~ 22675561 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger BED domain-containing protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1546719 | True | 757 | lncRNA | 0.43 | 1 | 22674805 | 22675561 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrrc4bb | LOC106579180 | coding | upstream | 3956 | 22658770 ~ 22670849 (+) |
| LOC110492853 | NA | coding | upstream | 93577 | 22576029 ~ 22581228 (+) |
| LOC110491640 | LOC106579183 | coding | upstream | 151767 | 22496064 ~ 22523038 (+) |
| LOC110491641 | LOC106579184 | coding | upstream | 179431 | 22478166 ~ 22495374 (+) |
| si:ch73-103b11.2 | LOC106579185 | coding | upstream | 199495 | 22368887 ~ 22475310 (+) |
| LOC110492854 | LOC106579179 | coding | downstream | 14747 | 22690308 ~ 22706146 (+) |
| si:ch211-234p6.5 | LOC106579177 | coding | downstream | 112268 | 22787829 ~ 22827477 (+) |
| LOC110491647 | LOC106579176 | coding | downstream | 159956 | 22828198 ~ 22876076 (+) |
| fgf21 | LOC106579352 | coding | downstream | 201696 | 22877257 ~ 22882635 (+) |
| si:dkey-197c15.6 | LOC105030686 | coding | downstream | 309352 | 22984913 ~ 22987169 (+) |
| G1353028 | NA | non-coding | upstream | 22850 | 22651205 ~ 22651955 (+) |
| G1353027 | NA | non-coding | upstream | 25402 | 22648850 ~ 22649403 (+) |
| G1353002 | NA | non-coding | upstream | 35650 | 22638733 ~ 22639155 (+) |
| G1353022 | NA | non-coding | upstream | 42174 | 22632348 ~ 22632631 (+) |
| G1352999 | NA | non-coding | upstream | 65813 | 22607674 ~ 22608992 (+) |
| G1353037 | NA | non-coding | downstream | 6493 | 22682054 ~ 22682338 (+) |
| G1353322 | NA | non-coding | downstream | 8564 | 22684125 ~ 22684439 (+) |
| G1353326 | NA | non-coding | downstream | 11302 | 22686863 ~ 22687106 (+) |
| G1353355 | LOC106579178 | non-coding | downstream | 45674 | 22721235 ~ 22722278 (+) |
| G1353332 | NA | non-coding | downstream | 47911 | 22723472 ~ 22724473 (+) |
| G1353021 | NA | other | upstream | 42500 | 22631879 ~ 22632305 (+) |
| LOC110491629 | LOC106579195 | other | upstream | 674554 | 21727617 ~ 22001169 (+) |
| G1351501 | LOC106579196 | other | upstream | 993924 | 21679224 ~ 21680881 (+) |
| G1351366 | LOC106579206 | other | upstream | 1269688 | 21402227 ~ 21405117 (+) |
| G1351274 | NA | other | upstream | 1453658 | 21220765 ~ 21221147 (+) |
| G1353519 | NA | other | downstream | 369708 | 23045269 ~ 23045884 (+) |
| LOC110491658 | LOC106579351 | other | downstream | 448298 | 23123859 ~ 23134383 (+) |
| G1353660 | NA | other | downstream | 622896 | 23298457 ~ 23298753 (+) |
| LOC110491671 | LOC106579157 | other | downstream | 804528 | 23430867 ~ 23488782 (+) |
| G1354668 | NA | other | downstream | 1318057 | 23993618 ~ 23995021 (+) |
