Gene
RNA
| Item | Value |
|---|---|
| gene id | G1353355 |
| gene name | LOC106579178 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 22721235 ~ 22722278 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: myosin-binding protein C, fast-type-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1547109 | True | 435 | lncRNA | 0.49 | 3 | 22721235 | 22722278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492854 | LOC106579179 | coding | upstream | 15089 | 22690308 ~ 22706146 (+) |
| lrrc4bb | LOC106579180 | coding | upstream | 50386 | 22658770 ~ 22670849 (+) |
| LOC110492853 | NA | coding | upstream | 140007 | 22576029 ~ 22581228 (+) |
| LOC110491640 | LOC106579183 | coding | upstream | 198197 | 22496064 ~ 22523038 (+) |
| LOC110491641 | LOC106579184 | coding | upstream | 225861 | 22478166 ~ 22495374 (+) |
| si:ch211-234p6.5 | LOC106579177 | coding | downstream | 65551 | 22787829 ~ 22827477 (+) |
| LOC110491647 | LOC106579176 | coding | downstream | 113239 | 22828198 ~ 22876076 (+) |
| fgf21 | LOC106579352 | coding | downstream | 154979 | 22877257 ~ 22882635 (+) |
| si:dkey-197c15.6 | LOC105030686 | coding | downstream | 262635 | 22984913 ~ 22987169 (+) |
| zgc:56095 | fri3 | coding | downstream | 291554 | 23013832 ~ 23043155 (+) |
| G1353326 | NA | non-coding | upstream | 34129 | 22686863 ~ 22687106 (+) |
| G1353322 | NA | non-coding | upstream | 36796 | 22684125 ~ 22684439 (+) |
| G1353037 | NA | non-coding | upstream | 38897 | 22682054 ~ 22682338 (+) |
| G1353001 | NA | non-coding | upstream | 45674 | 22674805 ~ 22675561 (+) |
| G1353028 | NA | non-coding | upstream | 69280 | 22651205 ~ 22651955 (+) |
| G1353332 | NA | non-coding | downstream | 1194 | 22723472 ~ 22724473 (+) |
| G1353387 | NA | non-coding | downstream | 46207 | 22768485 ~ 22768693 (+) |
| G1353420 | NA | non-coding | downstream | 112335 | 22834613 ~ 22834895 (+) |
| G1353449 | NA | non-coding | downstream | 169640 | 22891918 ~ 22892117 (+) |
| G1353021 | NA | other | upstream | 88930 | 22631879 ~ 22632305 (+) |
| LOC110491629 | LOC106579195 | other | upstream | 720984 | 21727617 ~ 22001169 (+) |
| G1351501 | LOC106579196 | other | upstream | 1040354 | 21679224 ~ 21680881 (+) |
| G1351366 | LOC106579206 | other | upstream | 1316118 | 21402227 ~ 21405117 (+) |
| G1351274 | NA | other | upstream | 1500088 | 21220765 ~ 21221147 (+) |
| G1353519 | NA | other | downstream | 322991 | 23045269 ~ 23045884 (+) |
| LOC110491658 | LOC106579351 | other | downstream | 401581 | 23123859 ~ 23134383 (+) |
| G1353660 | NA | other | downstream | 576179 | 23298457 ~ 23298753 (+) |
| LOC110491671 | LOC106579157 | other | downstream | 757811 | 23430867 ~ 23488782 (+) |
| G1354668 | NA | other | downstream | 1271340 | 23993618 ~ 23995021 (+) |
