Gene
RNA
| Item | Value |
|---|---|
| gene id | G1353387 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 22768485 ~ 22768693 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1547142 | True | 209 | lncRNA | 0.36 | 1 | 22768485 | 22768693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492854 | LOC106579179 | coding | upstream | 62339 | 22690308 ~ 22706146 (+) |
| lrrc4bb | LOC106579180 | coding | upstream | 97636 | 22658770 ~ 22670849 (+) |
| LOC110492853 | NA | coding | upstream | 187257 | 22576029 ~ 22581228 (+) |
| LOC110491640 | LOC106579183 | coding | upstream | 245447 | 22496064 ~ 22523038 (+) |
| LOC110491641 | LOC106579184 | coding | upstream | 273111 | 22478166 ~ 22495374 (+) |
| si:ch211-234p6.5 | LOC106579177 | coding | downstream | 19136 | 22787829 ~ 22827477 (+) |
| LOC110491647 | LOC106579176 | coding | downstream | 66824 | 22828198 ~ 22876076 (+) |
| fgf21 | LOC106579352 | coding | downstream | 108564 | 22877257 ~ 22882635 (+) |
| si:dkey-197c15.6 | LOC105030686 | coding | downstream | 216220 | 22984913 ~ 22987169 (+) |
| zgc:56095 | fri3 | coding | downstream | 245139 | 23013832 ~ 23043155 (+) |
| G1353332 | NA | non-coding | upstream | 44012 | 22723472 ~ 22724473 (+) |
| G1353355 | LOC106579178 | non-coding | upstream | 46207 | 22721235 ~ 22722278 (+) |
| G1353326 | NA | non-coding | upstream | 81379 | 22686863 ~ 22687106 (+) |
| G1353322 | NA | non-coding | upstream | 84046 | 22684125 ~ 22684439 (+) |
| G1353037 | NA | non-coding | upstream | 86147 | 22682054 ~ 22682338 (+) |
| G1353420 | NA | non-coding | downstream | 65920 | 22834613 ~ 22834895 (+) |
| G1353449 | NA | non-coding | downstream | 123225 | 22891918 ~ 22892117 (+) |
| G1353450 | NA | non-coding | downstream | 123730 | 22892423 ~ 22892814 (+) |
| G1353451 | NA | non-coding | downstream | 124532 | 22893225 ~ 22893512 (+) |
| G1353021 | NA | other | upstream | 136180 | 22631879 ~ 22632305 (+) |
| LOC110491629 | LOC106579195 | other | upstream | 768234 | 21727617 ~ 22001169 (+) |
| G1351501 | LOC106579196 | other | upstream | 1087604 | 21679224 ~ 21680881 (+) |
| G1351366 | LOC106579206 | other | upstream | 1363368 | 21402227 ~ 21405117 (+) |
| G1351274 | NA | other | upstream | 1547338 | 21220765 ~ 21221147 (+) |
| G1353519 | NA | other | downstream | 276576 | 23045269 ~ 23045884 (+) |
| LOC110491658 | LOC106579351 | other | downstream | 355166 | 23123859 ~ 23134383 (+) |
| G1353660 | NA | other | downstream | 529764 | 23298457 ~ 23298753 (+) |
| LOC110491671 | LOC106579157 | other | downstream | 711396 | 23430867 ~ 23488782 (+) |
| G1354668 | NA | other | downstream | 1224925 | 23993618 ~ 23995021 (+) |
