Gene
RNA
| Item | Value |
|---|---|
| gene id | G1353450 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 22892423 ~ 22892814 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1547218 | True | 392 | lncRNA | 0.43 | 1 | 22892423 | 22892814 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fgf21 | LOC106579352 | coding | upstream | 9788 | 22877257 ~ 22882635 (+) |
| LOC110491647 | LOC106579176 | coding | upstream | 16347 | 22828198 ~ 22876076 (+) |
| si:ch211-234p6.5 | LOC106579177 | coding | upstream | 64946 | 22787829 ~ 22827477 (+) |
| LOC110492854 | LOC106579179 | coding | upstream | 186277 | 22690308 ~ 22706146 (+) |
| lrrc4bb | LOC106579180 | coding | upstream | 221574 | 22658770 ~ 22670849 (+) |
| si:dkey-197c15.6 | LOC105030686 | coding | downstream | 92099 | 22984913 ~ 22987169 (+) |
| zgc:56095 | fri3 | coding | downstream | 121018 | 23013832 ~ 23043155 (+) |
| syt5b | LOC106579173 | coding | downstream | 161043 | 23053857 ~ 23069999 (+) |
| LOC110491656 | dnaaf3 | coding | downstream | 177977 | 23070791 ~ 23078486 (+) |
| LOC118939472 | NA | coding | downstream | 220580 | 23113394 ~ 23121852 (+) |
| G1353449 | NA | non-coding | upstream | 306 | 22891918 ~ 22892117 (+) |
| G1353420 | NA | non-coding | upstream | 57528 | 22834613 ~ 22834895 (+) |
| G1353387 | NA | non-coding | upstream | 123730 | 22768485 ~ 22768693 (+) |
| G1353332 | NA | non-coding | upstream | 167950 | 22723472 ~ 22724473 (+) |
| G1353451 | NA | non-coding | downstream | 411 | 22893225 ~ 22893512 (+) |
| G1353399 | NA | non-coding | downstream | 6277 | 22899091 ~ 22905565 (+) |
| G1353506 | NA | non-coding | downstream | 110604 | 23003418 ~ 23007616 (+) |
| G1353521 | NA | non-coding | downstream | 157716 | 23050530 ~ 23050755 (+) |
| G1353522 | NA | non-coding | downstream | 160005 | 23052819 ~ 23053045 (+) |
| G1353021 | NA | other | upstream | 260118 | 22631879 ~ 22632305 (+) |
| LOC110491629 | LOC106579195 | other | upstream | 892172 | 21727617 ~ 22001169 (+) |
| G1351501 | LOC106579196 | other | upstream | 1211542 | 21679224 ~ 21680881 (+) |
| G1351366 | LOC106579206 | other | upstream | 1487306 | 21402227 ~ 21405117 (+) |
| G1351274 | NA | other | upstream | 1671276 | 21220765 ~ 21221147 (+) |
| G1353519 | NA | other | downstream | 152455 | 23045269 ~ 23045884 (+) |
| LOC110491658 | LOC106579351 | other | downstream | 231045 | 23123859 ~ 23134383 (+) |
| G1353660 | NA | other | downstream | 405643 | 23298457 ~ 23298753 (+) |
| LOC110491671 | LOC106579157 | other | downstream | 587275 | 23430867 ~ 23488782 (+) |
| G1354668 | NA | other | downstream | 1100804 | 23993618 ~ 23995021 (+) |
