G1353521


Basic Information

Item Value
gene id G1353521
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23050530 ~ 23050755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1547302
tcaataacatagctcaggcagtaggaagcgctctcatccatttatatgcagatgatacagtcttgtactcagctggcccctccccggattttgtgttaaatgctctacaacaaagctttcttcgtgtccaacaagctttctctgcccttaaccttgttctgaacacctccaaaacaaaggtaatgtggtttggtaagaagaatgccactcttcccacaggtgttat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1547302 True 226 lncRNA 0.44 1 23050530 23050755

Neighbor

gene id symbol gene type direction distance location
zgc:56095 fri3 coding upstream 7375 23013832 ~ 23043155 (+)
si:dkey-197c15.6 LOC105030686 coding upstream 63361 22984913 ~ 22987169 (+)
fgf21 LOC106579352 coding upstream 167895 22877257 ~ 22882635 (+)
LOC110491647 LOC106579176 coding upstream 174454 22828198 ~ 22876076 (+)
si:ch211-234p6.5 LOC106579177 coding upstream 223053 22787829 ~ 22827477 (+)
syt5b LOC106579173 coding downstream 3102 23053857 ~ 23069999 (+)
LOC110491656 dnaaf3 coding downstream 20036 23070791 ~ 23078486 (+)
LOC118939472 NA coding downstream 62639 23113394 ~ 23121852 (+)
LOC110491658 LOC106579351 coding downstream 73535 23123859 ~ 23134383 (+)
LOC110491660 LOC106579168 coding downstream 157371 23208126 ~ 23213840 (+)
G1353506 NA non-coding upstream 42914 23003418 ~ 23007616 (+)
G1353399 NA non-coding upstream 144965 22899091 ~ 22905565 (+)
G1353451 NA non-coding upstream 157018 22893225 ~ 22893512 (+)
G1353450 NA non-coding upstream 157716 22892423 ~ 22892814 (+)
G1353449 NA non-coding upstream 158413 22891918 ~ 22892117 (+)
G1353522 NA non-coding downstream 2064 23052819 ~ 23053045 (+)
G1353531 NA non-coding downstream 30861 23081616 ~ 23082242 (+)
G1353534 NA non-coding downstream 34224 23084979 ~ 23085305 (+)
G1353537 NA non-coding downstream 38158 23088913 ~ 23089136 (+)
G1353541 NA non-coding downstream 42971 23093726 ~ 23093995 (+)
G1353519 NA other upstream 4646 23045269 ~ 23045884 (+)
G1353021 NA other upstream 418225 22631879 ~ 22632305 (+)
LOC110491629 LOC106579195 other upstream 1050279 21727617 ~ 22001169 (+)
G1351501 LOC106579196 other upstream 1369649 21679224 ~ 21680881 (+)
G1351366 LOC106579206 other upstream 1645413 21402227 ~ 21405117 (+)
G1353660 NA other downstream 247702 23298457 ~ 23298753 (+)
LOC110491671 LOC106579157 other downstream 429334 23430867 ~ 23488782 (+)
G1354668 NA other downstream 942863 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 1034953 24085708 ~ 24090034 (+)

Expression


Co-expression Network