G1353655


Basic Information

Item Value
gene id G1353655
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23291891 ~ 23292151 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1547453
ttctgggataatggtgttggtttgagccattaccagcctttcaaagcacttcatggctacggacgtgagtgctacgggtctgtagtcatttaggcaggttgcctttgtgttcttgggcacaggaactatggtggtctgcttgaaacatgttggtattacagactcaatcagggacatgttgaaaatgtcagtgaagacacctgccagttggtcagcacatgcccggagcacacgtcctggtaatcagtctggccccATAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1547453 True 261 lncRNA 0.49 1 23291891 23292151

Neighbor

gene id symbol gene type direction distance location
LOC110491666 LOC106579166 coding upstream 27582 23248659 ~ 23264309 (+)
LOC110491663 LOC106579167 coding upstream 56601 23217413 ~ 23235290 (+)
LOC110491660 LOC106579168 coding upstream 78051 23208126 ~ 23213840 (+)
LOC110491658 LOC106579351 coding upstream 165435 23123859 ~ 23134383 (+)
LOC118939472 NA coding upstream 170039 23113394 ~ 23121852 (+)
LOC110491669 LOC106579159 coding downstream 107245 23399396 ~ 23404624 (+)
LOC110491671 LOC106579157 coding downstream 138716 23430867 ~ 23488782 (+)
becn1 becn1 coding downstream 259642 23551793 ~ 23567658 (+)
trnag-ccc-4 NA coding downstream 298547 23590698 ~ 23590769 (+)
trnaw-cca-8 NA coding downstream 299725 23591876 ~ 23591947 (+)
G1353653 NA non-coding upstream 2290 23289396 ~ 23289601 (+)
G1353618 NA non-coding upstream 84247 23206612 ~ 23207644 (+)
G1353656 NA non-coding downstream 51 23292202 ~ 23292457 (+)
G1353659 NA non-coding downstream 5282 23297433 ~ 23298116 (+)
G1353661 NA non-coding downstream 6756 23298907 ~ 23299138 (+)
G1353662 NA non-coding downstream 7872 23300023 ~ 23300419 (+)
G1353663 NA non-coding downstream 8423 23300574 ~ 23300869 (+)
G1353519 NA other upstream 246007 23045269 ~ 23045884 (+)
G1353021 NA other upstream 659586 22631879 ~ 22632305 (+)
LOC110491629 LOC106579195 other upstream 1291640 21727617 ~ 22001169 (+)
G1351501 LOC106579196 other upstream 1611010 21679224 ~ 21680881 (+)
G1353660 NA other downstream 6306 23298457 ~ 23298753 (+)
G1354668 NA other downstream 701467 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 793557 24085708 ~ 24090034 (+)
LOC110491698 LOC106579132 other downstream 1378288 24670341 ~ 24681115 (+)

Expression


Co-expression Network