G1353662


Basic Information

Item Value
gene id G1353662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23300023 ~ 23300419 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1547460
ACTCTGGTAGGGTTTGCAGATAGAGACAAAACAGTGAGGCATGGAATGGGCAGAGGGTGGGTATAGCCTCGACTCACCGTAATCCATGGCAGGTAGAGAGAGCAACCCACGAGCCTGGTACCCCCCTCAGTCGCCCGTGGTAATAACAGTGTTCCCCtccctgtaaacacacacaaccattcaCTCAGCATTAATTCTACTTTTCCCTCCCAAGTTAAAGAAACAAAGGCACAAGTCAATGAAATAGAGTGAGCTAACCAACGACGAAAATGCAATCAACACCACTGATTAAATGTGAAGCAACACCCCCCAAGAGTGGGTCTGAATGAGCTGCTTGGTCAACAAAGCTGTATCAGTAACTACTATAAATCAGAAGAGAGAACCTACACCTACAGTG

Function

NR:

description
PREDICTED: ATP-citrate synthase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1547460 True 397 lncRNA 0.47 1 23300023 23300419

Neighbor

gene id symbol gene type direction distance location
LOC110491666 LOC106579166 coding upstream 35714 23248659 ~ 23264309 (+)
LOC110491663 LOC106579167 coding upstream 64733 23217413 ~ 23235290 (+)
LOC110491660 LOC106579168 coding upstream 86183 23208126 ~ 23213840 (+)
LOC110491658 LOC106579351 coding upstream 173567 23123859 ~ 23134383 (+)
LOC118939472 NA coding upstream 178171 23113394 ~ 23121852 (+)
LOC110491669 LOC106579159 coding downstream 98977 23399396 ~ 23404624 (+)
LOC110491671 LOC106579157 coding downstream 130448 23430867 ~ 23488782 (+)
becn1 becn1 coding downstream 251374 23551793 ~ 23567658 (+)
trnag-ccc-4 NA coding downstream 290279 23590698 ~ 23590769 (+)
trnaw-cca-8 NA coding downstream 291457 23591876 ~ 23591947 (+)
G1353661 NA non-coding upstream 885 23298907 ~ 23299138 (+)
G1353659 NA non-coding upstream 1907 23297433 ~ 23298116 (+)
G1353656 NA non-coding upstream 7566 23292202 ~ 23292457 (+)
G1353655 NA non-coding upstream 7872 23291891 ~ 23292151 (+)
G1353653 NA non-coding upstream 10422 23289396 ~ 23289601 (+)
G1353663 NA non-coding downstream 155 23300574 ~ 23300869 (+)
G1353664 NA non-coding downstream 947 23301366 ~ 23301601 (+)
G1354034 LOC106579162 non-coding downstream 24098 23324517 ~ 23325450 (+)
G1354035 NA non-coding downstream 26508 23326927 ~ 23327275 (+)
G1354038 NA non-coding downstream 30049 23330468 ~ 23330682 (+)
G1353660 NA other upstream 1270 23298457 ~ 23298753 (+)
G1353519 NA other upstream 254139 23045269 ~ 23045884 (+)
G1353021 NA other upstream 667718 22631879 ~ 22632305 (+)
LOC110491629 LOC106579195 other upstream 1299772 21727617 ~ 22001169 (+)
G1354668 NA other downstream 693199 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 785289 24085708 ~ 24090034 (+)
LOC110491698 LOC106579132 other downstream 1370020 24670341 ~ 24681115 (+)
G1355273 NA other downstream 1380995 24681414 ~ 24684055 (+)

Expression


Co-expression Network