Gene
RNA
| Item | Value |
|---|---|
| gene id | G1354051 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 23344049 ~ 23345102 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1547882 | True | 1054 | lncRNA | 0.36 | 1 | 23344049 | 23345102 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491666 | LOC106579166 | coding | upstream | 79740 | 23248659 ~ 23264309 (+) |
| LOC110491663 | LOC106579167 | coding | upstream | 108759 | 23217413 ~ 23235290 (+) |
| LOC110491660 | LOC106579168 | coding | upstream | 130209 | 23208126 ~ 23213840 (+) |
| LOC110491658 | LOC106579351 | coding | upstream | 217593 | 23123859 ~ 23134383 (+) |
| LOC118939472 | NA | coding | upstream | 222197 | 23113394 ~ 23121852 (+) |
| LOC110491669 | LOC106579159 | coding | downstream | 54294 | 23399396 ~ 23404624 (+) |
| LOC110491671 | LOC106579157 | coding | downstream | 85765 | 23430867 ~ 23488782 (+) |
| becn1 | becn1 | coding | downstream | 206691 | 23551793 ~ 23567658 (+) |
| trnag-ccc-4 | NA | coding | downstream | 245596 | 23590698 ~ 23590769 (+) |
| trnaw-cca-8 | NA | coding | downstream | 246774 | 23591876 ~ 23591947 (+) |
| G1354047 | NA | non-coding | upstream | 4342 | 23339494 ~ 23339707 (+) |
| G1354045 | NA | non-coding | upstream | 6050 | 23337783 ~ 23337999 (+) |
| G1354042 | NA | non-coding | upstream | 9298 | 23334041 ~ 23334751 (+) |
| G1354041 | LOC106579162 | non-coding | upstream | 10200 | 23333563 ~ 23333849 (+) |
| G1354038 | NA | non-coding | upstream | 13367 | 23330468 ~ 23330682 (+) |
| G1354052 | LOC106579161 | non-coding | downstream | 1709 | 23346811 ~ 23347286 (+) |
| G1354053 | NA | non-coding | downstream | 2942 | 23348044 ~ 23348305 (+) |
| G1354065 | NA | non-coding | downstream | 24999 | 23370101 ~ 23370338 (+) |
| G1354070 | NA | non-coding | downstream | 28885 | 23373987 ~ 23374230 (+) |
| G1354080 | NA | non-coding | downstream | 39912 | 23385014 ~ 23385629 (+) |
| G1353660 | NA | other | upstream | 45296 | 23298457 ~ 23298753 (+) |
| G1353519 | NA | other | upstream | 298165 | 23045269 ~ 23045884 (+) |
| G1353021 | NA | other | upstream | 711744 | 22631879 ~ 22632305 (+) |
| LOC110491629 | LOC106579195 | other | upstream | 1343798 | 21727617 ~ 22001169 (+) |
| G1354668 | NA | other | downstream | 648516 | 23993618 ~ 23995021 (+) |
| G1354681 | rpl19 | other | downstream | 740606 | 24085708 ~ 24090034 (+) |
| LOC110491698 | LOC106579132 | other | downstream | 1325337 | 24670341 ~ 24681115 (+) |
| G1355273 | NA | other | downstream | 1336312 | 24681414 ~ 24684055 (+) |
