G1354711


Basic Information

Item Value
gene id G1354711
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24061993 ~ 24062196 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1548594
gtttacatacaccttagccaaatacatttaaactctgtttttcacaattcctgacatttaatcctagtaaaaagtccctgtcttaggtcagttaggatcaccactttattttaagaatgtgaaatgtcagaataatagtagagagaatgatttatttcagcgtttatttctttcatcacattcccagtgggtcagaaggataca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1548594 True 204 lncRNA 0.33 1 24061993 24062196

Neighbor

gene id symbol gene type direction distance location
med1 med1 coding upstream 109303 23929827 ~ 23952690 (+)
neurod2 LOC106579148 coding upstream 160611 23897621 ~ 23901382 (+)
trnaw-cca-55 NA coding upstream 376244 23685678 ~ 23685749 (+)
trnaw-cca-54 NA coding upstream 377476 23684446 ~ 23684517 (+)
trnaw-cca-53 NA coding upstream 380616 23681306 ~ 23681377 (+)
gpam gpam coding downstream 39883 24102079 ~ 24147369 (+)
LOC110491683 LOC106579144 coding downstream 103994 24166190 ~ 24201252 (+)
ghdc ghdc coding downstream 149983 24212179 ~ 24234669 (+)
kcnh4b kcnh4 coding downstream 180344 24242540 ~ 24311996 (+)
LOC110491689 rab5c coding downstream 287813 24350009 ~ 24363391 (+)
G1354708 NA non-coding upstream 3650 24058074 ~ 24058343 (+)
G1354702 NA non-coding upstream 8867 24052788 ~ 24053126 (+)
G1354697 NA non-coding upstream 14792 24046819 ~ 24047201 (+)
G1354673 NA non-coding upstream 58309 24003443 ~ 24003684 (+)
G1354669 NA non-coding upstream 68799 23992883 ~ 23993194 (+)
G1354729 NA non-coding downstream 31354 24093550 ~ 24093997 (+)
G1354733 NA non-coding downstream 38470 24100666 ~ 24100889 (+)
G1354769 NA non-coding downstream 114023 24176219 ~ 24176797 (+)
G1354772 NA non-coding downstream 125069 24187265 ~ 24208476 (+)
G1354668 NA other upstream 66972 23993618 ~ 23995021 (+)
LOC110491671 LOC106579157 other upstream 573381 23430867 ~ 23488782 (+)
G1353660 NA other upstream 763240 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 935682 23123859 ~ 23134383 (+)
G1353519 NA other upstream 1016109 23045269 ~ 23045884 (+)
G1354681 rpl19 other downstream 23512 24085708 ~ 24090034 (+)
LOC110491698 LOC106579132 other downstream 608243 24670341 ~ 24681115 (+)
G1355273 NA other downstream 619218 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 702443 24764607 ~ 24783513 (+)
znf281b LOC106578343 other downstream 2014345 26076461 ~ 26107407 (+)

Expression


Co-expression Network