G1354729


Basic Information

Item Value
gene id G1354729
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24093550 ~ 24093997 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1548612
gaaaattccaaaaaatgatgtcatggctttagaagcttctgataggctaattgacatcatttgagtcaattggaggtattttaaggcctaccttcaaactcaatgcctctttgcttaacgtcatgggaaaatctaaagaaatcacccaagacctcaaaaacaaatgtgtaaacctccacaagtctggttcatccttgggagcgatttccaaacgcctgaaggtaccacgttcaactgtacaaacaatagtacgcaagtataaacaccatgggaccacgcagccgtcataccgctcaggaatgagacacattctgtctcctagagatgaatgcactttggtgcgaaaagtccaactcaatcccagaacagcacagaccttgtgaagatgctggaggaaacaggtacaaaattatctatatccacagtaaaacgcgtcctatatcgacat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1548612 True 448 lncRNA 0.42 1 24093550 24093997

Neighbor

gene id symbol gene type direction distance location
med1 med1 coding upstream 140860 23929827 ~ 23952690 (+)
neurod2 LOC106579148 coding upstream 192168 23897621 ~ 23901382 (+)
trnaw-cca-55 NA coding upstream 407801 23685678 ~ 23685749 (+)
trnaw-cca-54 NA coding upstream 409033 23684446 ~ 23684517 (+)
trnaw-cca-53 NA coding upstream 412173 23681306 ~ 23681377 (+)
gpam gpam coding downstream 8082 24102079 ~ 24147369 (+)
LOC110491683 LOC106579144 coding downstream 72193 24166190 ~ 24201252 (+)
ghdc ghdc coding downstream 118182 24212179 ~ 24234669 (+)
kcnh4b kcnh4 coding downstream 148543 24242540 ~ 24311996 (+)
LOC110491689 rab5c coding downstream 256012 24350009 ~ 24363391 (+)
G1354711 NA non-coding upstream 31354 24061993 ~ 24062196 (+)
G1354708 NA non-coding upstream 35207 24058074 ~ 24058343 (+)
G1354702 NA non-coding upstream 40424 24052788 ~ 24053126 (+)
G1354697 NA non-coding upstream 46349 24046819 ~ 24047201 (+)
G1354673 NA non-coding upstream 89866 24003443 ~ 24003684 (+)
G1354733 NA non-coding downstream 6669 24100666 ~ 24100889 (+)
G1354769 NA non-coding downstream 82222 24176219 ~ 24176797 (+)
G1354772 NA non-coding downstream 93268 24187265 ~ 24208476 (+)
G1354796 NA non-coding downstream 153143 24247140 ~ 24247407 (+)
G1354681 rpl19 other upstream 3516 24085708 ~ 24090034 (+)
G1354668 NA other upstream 98529 23993618 ~ 23995021 (+)
LOC110491671 LOC106579157 other upstream 604938 23430867 ~ 23488782 (+)
G1353660 NA other upstream 794797 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 967239 23123859 ~ 23134383 (+)
LOC110491698 LOC106579132 other downstream 576442 24670341 ~ 24681115 (+)
G1355273 NA other downstream 587417 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 670642 24764607 ~ 24783513 (+)
znf281b LOC106578343 other downstream 1982544 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 2210954 26283071 ~ 26314809 (+)

Expression


Co-expression Network