Gene
RNA
| Item | Value |
|---|---|
| gene id | G1354733 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 24100666 ~ 24100889 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1548616 | True | 224 | lncRNA | 0.45 | 1 | 24100666 | 24100889 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| med1 | med1 | coding | upstream | 147976 | 23929827 ~ 23952690 (+) |
| neurod2 | LOC106579148 | coding | upstream | 199284 | 23897621 ~ 23901382 (+) |
| trnaw-cca-55 | NA | coding | upstream | 414917 | 23685678 ~ 23685749 (+) |
| trnaw-cca-54 | NA | coding | upstream | 416149 | 23684446 ~ 23684517 (+) |
| trnaw-cca-53 | NA | coding | upstream | 419289 | 23681306 ~ 23681377 (+) |
| gpam | gpam | coding | downstream | 1190 | 24102079 ~ 24147369 (+) |
| LOC110491683 | LOC106579144 | coding | downstream | 65301 | 24166190 ~ 24201252 (+) |
| ghdc | ghdc | coding | downstream | 111290 | 24212179 ~ 24234669 (+) |
| kcnh4b | kcnh4 | coding | downstream | 141651 | 24242540 ~ 24311996 (+) |
| LOC110491689 | rab5c | coding | downstream | 249120 | 24350009 ~ 24363391 (+) |
| G1354729 | NA | non-coding | upstream | 6669 | 24093550 ~ 24093997 (+) |
| G1354711 | NA | non-coding | upstream | 38470 | 24061993 ~ 24062196 (+) |
| G1354708 | NA | non-coding | upstream | 42323 | 24058074 ~ 24058343 (+) |
| G1354702 | NA | non-coding | upstream | 47540 | 24052788 ~ 24053126 (+) |
| G1354697 | NA | non-coding | upstream | 53465 | 24046819 ~ 24047201 (+) |
| G1354769 | NA | non-coding | downstream | 75330 | 24176219 ~ 24176797 (+) |
| G1354772 | NA | non-coding | downstream | 86376 | 24187265 ~ 24208476 (+) |
| G1354796 | NA | non-coding | downstream | 146251 | 24247140 ~ 24247407 (+) |
| G1354812 | NA | non-coding | downstream | 171201 | 24272090 ~ 24272358 (+) |
| G1354681 | rpl19 | other | upstream | 10632 | 24085708 ~ 24090034 (+) |
| G1354668 | NA | other | upstream | 105645 | 23993618 ~ 23995021 (+) |
| LOC110491671 | LOC106579157 | other | upstream | 612054 | 23430867 ~ 23488782 (+) |
| G1353660 | NA | other | upstream | 801913 | 23298457 ~ 23298753 (+) |
| LOC110491658 | LOC106579351 | other | upstream | 974355 | 23123859 ~ 23134383 (+) |
| LOC110491698 | LOC106579132 | other | downstream | 569550 | 24670341 ~ 24681115 (+) |
| G1355273 | NA | other | downstream | 580525 | 24681414 ~ 24684055 (+) |
| dcakd | dcakd | other | downstream | 663750 | 24764607 ~ 24783513 (+) |
| znf281b | LOC106578343 | other | downstream | 1975652 | 26076461 ~ 26107407 (+) |
| mpp3b | LOC106579097 | other | downstream | 2204062 | 26283071 ~ 26314809 (+) |
