G1354772


Basic Information

Item Value
gene id G1354772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24187265 ~ 24208476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1548657
gccattatcaacggcGACCCTGGAGCTATTAGGTTTAAGTGCTTTGTTCAAGGGCAcgtcggcagatttttcaccttgtcagctcggggattcgttactggcccaacactctaactgctAGGTTAGAATGAGTTACAATTACATTACTGATTTATTGTAAATATATTTATAATTGGACTTAATTGGCATTTTACTCGAACCTTTTGTGGTTTTGCCAAATTGtgatacatatacagtgccttgcgaaagtatttggcccccttgaactttgtgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgaaattttagagaaatgtcatcatcgaatattgtaagagctttctgTGTCTGCTTACATGCCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1548657 True 434 lncRNA 0.38 2 24187265 24208476

Neighbor

gene id symbol gene type direction distance location
gpam gpam coding upstream 39896 24102079 ~ 24147369 (+)
med1 med1 coding upstream 234575 23929827 ~ 23952690 (+)
neurod2 LOC106579148 coding upstream 285883 23897621 ~ 23901382 (+)
trnaw-cca-55 NA coding upstream 501516 23685678 ~ 23685749 (+)
trnaw-cca-54 NA coding upstream 502748 23684446 ~ 23684517 (+)
ghdc ghdc coding downstream 3703 24212179 ~ 24234669 (+)
kcnh4b kcnh4 coding downstream 34064 24242540 ~ 24311996 (+)
LOC110491689 rab5c coding downstream 141533 24350009 ~ 24363391 (+)
LOC110491690 znf385c coding downstream 173765 24382241 ~ 24520933 (+)
LOC110491693 LOC106579137 coding downstream 313522 24521646 ~ 24560785 (+)
G1354769 NA non-coding upstream 10468 24176219 ~ 24176797 (+)
G1354733 NA non-coding upstream 86376 24100666 ~ 24100889 (+)
G1354729 NA non-coding upstream 93268 24093550 ~ 24093997 (+)
G1354711 NA non-coding upstream 125069 24061993 ~ 24062196 (+)
G1354708 NA non-coding upstream 128922 24058074 ~ 24058343 (+)
G1354796 NA non-coding downstream 38664 24247140 ~ 24247407 (+)
G1354812 NA non-coding downstream 63614 24272090 ~ 24272358 (+)
G1354818 NA non-coding downstream 72802 24281278 ~ 24281501 (+)
G1354819 NA non-coding downstream 73335 24281811 ~ 24282038 (+)
G1354681 rpl19 other upstream 97231 24085708 ~ 24090034 (+)
G1354668 NA other upstream 192244 23993618 ~ 23995021 (+)
LOC110491671 LOC106579157 other upstream 698653 23430867 ~ 23488782 (+)
G1353660 NA other upstream 888512 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 1060954 23123859 ~ 23134383 (+)
LOC110491698 LOC106579132 other downstream 461963 24670341 ~ 24681115 (+)
G1355273 NA other downstream 472938 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 556163 24764607 ~ 24783513 (+)
znf281b LOC106578343 other downstream 1868065 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 2096475 26283071 ~ 26314809 (+)

Expression


Co-expression Network