G1354796


Basic Information

Item Value
gene id G1354796
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24247140 ~ 24247407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1548681
tggaatatgtggacatctataagtacctaggtgtctggctagactgcaaactctccttccagactcatatcaaacatctccaatcgaaaatcaaatcaagagtcggctttctattccgcaacaaagcctccttcactcacgccgccaagcttaccctagtaaaactgactatcctaccgatcctcgacttcggcgatgtcatctacaaaatggcttccaacactctactcagcaaactggatgcagtctatcacagtgccatccgttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1548681 True 268 lncRNA 0.46 1 24247140 24247407

Neighbor

gene id symbol gene type direction distance location
ghdc ghdc coding upstream 12471 24212179 ~ 24234669 (+)
LOC110491683 LOC106579144 coding upstream 45888 24166190 ~ 24201252 (+)
gpam gpam coding upstream 99771 24102079 ~ 24147369 (+)
med1 med1 coding upstream 294450 23929827 ~ 23952690 (+)
neurod2 LOC106579148 coding upstream 345758 23897621 ~ 23901382 (+)
LOC110491689 rab5c coding downstream 102602 24350009 ~ 24363391 (+)
LOC110491690 znf385c coding downstream 134834 24382241 ~ 24520933 (+)
LOC110491693 LOC106579137 coding downstream 274591 24521646 ~ 24560785 (+)
LOC110491694 atp6v0a1 coding downstream 315378 24562785 ~ 24602678 (+)
LOC110491695 NA coding downstream 358657 24606064 ~ 24607211 (+)
G1354772 NA non-coding upstream 38664 24187265 ~ 24208476 (+)
G1354769 NA non-coding upstream 70343 24176219 ~ 24176797 (+)
G1354733 NA non-coding upstream 146251 24100666 ~ 24100889 (+)
G1354729 NA non-coding upstream 153143 24093550 ~ 24093997 (+)
G1354711 NA non-coding upstream 184944 24061993 ~ 24062196 (+)
G1354812 NA non-coding downstream 24683 24272090 ~ 24272358 (+)
G1354818 NA non-coding downstream 33871 24281278 ~ 24281501 (+)
G1354819 NA non-coding downstream 34404 24281811 ~ 24282038 (+)
G1354820 NA non-coding downstream 35060 24282467 ~ 24282671 (+)
G1354827 NA non-coding downstream 82101 24329508 ~ 24330130 (+)
G1354681 rpl19 other upstream 157106 24085708 ~ 24090034 (+)
G1354668 NA other upstream 252119 23993618 ~ 23995021 (+)
LOC110491671 LOC106579157 other upstream 758528 23430867 ~ 23488782 (+)
G1353660 NA other upstream 948387 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 1120829 23123859 ~ 23134383 (+)
LOC110491698 LOC106579132 other downstream 423032 24670341 ~ 24681115 (+)
G1355273 NA other downstream 434007 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 517232 24764607 ~ 24783513 (+)
znf281b LOC106578343 other downstream 1829134 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 2057544 26283071 ~ 26314809 (+)

Expression


Co-expression Network