G1354818


Basic Information

Item Value
gene id G1354818
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24281278 ~ 24281501 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1548705
GGATCTTTACTCTGTGCTGAATTCTGCTCGAGAGAaagtctgtctttctgtgttaCAAGCGACATATAAACCCGGGTCGCTCATGAGAGAAACCAACGGGCTGACACTGATTTAGAAGTCACAAGAAGGGCTTCCTCATCAAGAGACGATGATCTGTCTGTGTCATGGTTTGTTTTTCTCAGCTCAAAGCATGCTGGGGGATATACGCGTTAGGGTTGCCAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1548705 True 224 lncRNA 0.47 1 24281278 24281501

Neighbor

gene id symbol gene type direction distance location
ghdc ghdc coding upstream 46609 24212179 ~ 24234669 (+)
LOC110491683 LOC106579144 coding upstream 80026 24166190 ~ 24201252 (+)
gpam gpam coding upstream 133909 24102079 ~ 24147369 (+)
med1 med1 coding upstream 328588 23929827 ~ 23952690 (+)
neurod2 LOC106579148 coding upstream 379896 23897621 ~ 23901382 (+)
LOC110491689 rab5c coding downstream 68508 24350009 ~ 24363391 (+)
LOC110491690 znf385c coding downstream 100740 24382241 ~ 24520933 (+)
LOC110491693 LOC106579137 coding downstream 240497 24521646 ~ 24560785 (+)
LOC110491694 atp6v0a1 coding downstream 281284 24562785 ~ 24602678 (+)
LOC110491695 NA coding downstream 324563 24606064 ~ 24607211 (+)
G1354812 NA non-coding upstream 8920 24272090 ~ 24272358 (+)
G1354796 NA non-coding upstream 33871 24247140 ~ 24247407 (+)
G1354772 NA non-coding upstream 72802 24187265 ~ 24208476 (+)
G1354769 NA non-coding upstream 104481 24176219 ~ 24176797 (+)
G1354733 NA non-coding upstream 180389 24100666 ~ 24100889 (+)
G1354819 NA non-coding downstream 310 24281811 ~ 24282038 (+)
G1354820 NA non-coding downstream 966 24282467 ~ 24282671 (+)
G1354827 NA non-coding downstream 48007 24329508 ~ 24330130 (+)
G1354834 NA non-coding downstream 57089 24338590 ~ 24338795 (+)
G1354837 NA non-coding downstream 58727 24340228 ~ 24340617 (+)
G1354681 rpl19 other upstream 191244 24085708 ~ 24090034 (+)
G1354668 NA other upstream 286257 23993618 ~ 23995021 (+)
LOC110491671 LOC106579157 other upstream 792666 23430867 ~ 23488782 (+)
G1353660 NA other upstream 982525 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 1154967 23123859 ~ 23134383 (+)
LOC110491698 LOC106579132 other downstream 388938 24670341 ~ 24681115 (+)
G1355273 NA other downstream 399913 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 483138 24764607 ~ 24783513 (+)
znf281b LOC106578343 other downstream 1795040 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 2023450 26283071 ~ 26314809 (+)

Expression


Co-expression Network