Gene
RNA
| Item | Value |
|---|---|
| gene id | G1354819 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 24281811 ~ 24282038 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1548706 | True | 228 | lncRNA | 0.42 | 1 | 24281811 | 24282038 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ghdc | ghdc | coding | upstream | 47142 | 24212179 ~ 24234669 (+) |
| LOC110491683 | LOC106579144 | coding | upstream | 80559 | 24166190 ~ 24201252 (+) |
| gpam | gpam | coding | upstream | 134442 | 24102079 ~ 24147369 (+) |
| med1 | med1 | coding | upstream | 329121 | 23929827 ~ 23952690 (+) |
| neurod2 | LOC106579148 | coding | upstream | 380429 | 23897621 ~ 23901382 (+) |
| LOC110491689 | rab5c | coding | downstream | 67971 | 24350009 ~ 24363391 (+) |
| LOC110491690 | znf385c | coding | downstream | 100203 | 24382241 ~ 24520933 (+) |
| LOC110491693 | LOC106579137 | coding | downstream | 239960 | 24521646 ~ 24560785 (+) |
| LOC110491694 | atp6v0a1 | coding | downstream | 280747 | 24562785 ~ 24602678 (+) |
| LOC110491695 | NA | coding | downstream | 324026 | 24606064 ~ 24607211 (+) |
| G1354818 | NA | non-coding | upstream | 310 | 24281278 ~ 24281501 (+) |
| G1354812 | NA | non-coding | upstream | 9453 | 24272090 ~ 24272358 (+) |
| G1354796 | NA | non-coding | upstream | 34404 | 24247140 ~ 24247407 (+) |
| G1354772 | NA | non-coding | upstream | 73335 | 24187265 ~ 24208476 (+) |
| G1354769 | NA | non-coding | upstream | 105014 | 24176219 ~ 24176797 (+) |
| G1354820 | NA | non-coding | downstream | 429 | 24282467 ~ 24282671 (+) |
| G1354827 | NA | non-coding | downstream | 47470 | 24329508 ~ 24330130 (+) |
| G1354834 | NA | non-coding | downstream | 56552 | 24338590 ~ 24338795 (+) |
| G1354837 | NA | non-coding | downstream | 58190 | 24340228 ~ 24340617 (+) |
| G1354836 | NA | non-coding | downstream | 58662 | 24340700 ~ 24343798 (+) |
| G1354681 | rpl19 | other | upstream | 191777 | 24085708 ~ 24090034 (+) |
| G1354668 | NA | other | upstream | 286790 | 23993618 ~ 23995021 (+) |
| LOC110491671 | LOC106579157 | other | upstream | 793199 | 23430867 ~ 23488782 (+) |
| G1353660 | NA | other | upstream | 983058 | 23298457 ~ 23298753 (+) |
| LOC110491658 | LOC106579351 | other | upstream | 1155500 | 23123859 ~ 23134383 (+) |
| LOC110491698 | LOC106579132 | other | downstream | 388401 | 24670341 ~ 24681115 (+) |
| G1355273 | NA | other | downstream | 399376 | 24681414 ~ 24684055 (+) |
| dcakd | dcakd | other | downstream | 482601 | 24764607 ~ 24783513 (+) |
| znf281b | LOC106578343 | other | downstream | 1794503 | 26076461 ~ 26107407 (+) |
| mpp3b | LOC106579097 | other | downstream | 2022913 | 26283071 ~ 26314809 (+) |
