Gene
RNA
| Item | Value |
|---|---|
| gene id | G1354827 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 24329508 ~ 24330130 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110491687 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1548715 | True | 623 | lncRNA | 0.46 | 1 | 24329508 | 24330130 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kcnh4b | kcnh4 | coding | upstream | 17512 | 24242540 ~ 24311996 (+) |
| ghdc | ghdc | coding | upstream | 94839 | 24212179 ~ 24234669 (+) |
| LOC110491683 | LOC106579144 | coding | upstream | 128256 | 24166190 ~ 24201252 (+) |
| gpam | gpam | coding | upstream | 182139 | 24102079 ~ 24147369 (+) |
| med1 | med1 | coding | upstream | 376818 | 23929827 ~ 23952690 (+) |
| LOC110491689 | rab5c | coding | downstream | 19879 | 24350009 ~ 24363391 (+) |
| LOC110491690 | znf385c | coding | downstream | 52111 | 24382241 ~ 24520933 (+) |
| LOC110491693 | LOC106579137 | coding | downstream | 191868 | 24521646 ~ 24560785 (+) |
| LOC110491694 | atp6v0a1 | coding | downstream | 232655 | 24562785 ~ 24602678 (+) |
| LOC110491695 | NA | coding | downstream | 275934 | 24606064 ~ 24607211 (+) |
| G1354820 | NA | non-coding | upstream | 46837 | 24282467 ~ 24282671 (+) |
| G1354819 | NA | non-coding | upstream | 47470 | 24281811 ~ 24282038 (+) |
| G1354818 | NA | non-coding | upstream | 48007 | 24281278 ~ 24281501 (+) |
| G1354812 | NA | non-coding | upstream | 57150 | 24272090 ~ 24272358 (+) |
| G1354834 | NA | non-coding | downstream | 8460 | 24338590 ~ 24338795 (+) |
| G1354837 | NA | non-coding | downstream | 10098 | 24340228 ~ 24340617 (+) |
| G1354836 | NA | non-coding | downstream | 10570 | 24340700 ~ 24343798 (+) |
| G1354838 | NA | non-coding | downstream | 14318 | 24344448 ~ 24345329 (+) |
| G1354839 | NA | non-coding | downstream | 15255 | 24345385 ~ 24345726 (+) |
| G1354681 | rpl19 | other | upstream | 239474 | 24085708 ~ 24090034 (+) |
| G1354668 | NA | other | upstream | 334487 | 23993618 ~ 23995021 (+) |
| LOC110491671 | LOC106579157 | other | upstream | 840896 | 23430867 ~ 23488782 (+) |
| G1353660 | NA | other | upstream | 1030755 | 23298457 ~ 23298753 (+) |
| LOC110491658 | LOC106579351 | other | upstream | 1203197 | 23123859 ~ 23134383 (+) |
| LOC110491698 | LOC106579132 | other | downstream | 340309 | 24670341 ~ 24681115 (+) |
| G1355273 | NA | other | downstream | 351284 | 24681414 ~ 24684055 (+) |
| dcakd | dcakd | other | downstream | 434509 | 24764607 ~ 24783513 (+) |
| znf281b | LOC106578343 | other | downstream | 1746411 | 26076461 ~ 26107407 (+) |
| mpp3b | LOC106579097 | other | downstream | 1974821 | 26283071 ~ 26314809 (+) |
