G1355239


Basic Information

Item Value
gene id G1355239
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24621695 ~ 24636240 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1549157
aacgctgcttcgagggtggctgttgtcgtattgctggttcgagcccagggaggagcgaggagagggacggaagctatactgttacactggcaatactaaagtgcctataagaacatctaatagtcaaaggttaatgaaatacaaatggtatagagggaaatagtcctataattcctataataactacaacctaaaacttcttacctgggaatattgaagactcatgttaaaaggaaccaccagctttcatatgttctcatcttctgagcaaggaactgaaacgttagctttcttacatagcatatattgcacttttactttcttctccaacacttagttttgcattatttaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1549157 True 354 lncRNA 0.39 2 24621695 24636240

Neighbor

gene id symbol gene type direction distance location
LOC110491695 NA coding upstream 14484 24606064 ~ 24607211 (+)
LOC110491694 atp6v0a1 coding upstream 19017 24562785 ~ 24602678 (+)
LOC110491693 LOC106579137 coding upstream 60910 24521646 ~ 24560785 (+)
LOC110491690 znf385c coding upstream 100762 24382241 ~ 24520933 (+)
LOC110491689 rab5c coding upstream 258304 24350009 ~ 24363391 (+)
LOC110491698 LOC106579132 coding downstream 34101 24670341 ~ 24681115 (+)
coasy coasy coding downstream 48690 24684930 ~ 24700595 (+)
pus3 pus3 coding downstream 113868 24750108 ~ 24759143 (+)
dcakd dcakd coding downstream 128367 24764607 ~ 24783513 (+)
LOC110491705 ud2a2 coding downstream 189923 24826163 ~ 24829318 (+)
G1355148 NA non-coding upstream 176944 24444301 ~ 24444751 (+)
G1355110 NA non-coding upstream 226663 24394659 ~ 24395032 (+)
G1355107 NA non-coding upstream 231712 24389763 ~ 24389983 (+)
G1355072 NA non-coding upstream 250974 24370423 ~ 24370721 (+)
naglu naglu non-coding downstream 6607 24626682 ~ 24645022 (+)
G1355100 NA non-coding downstream 21277 24657517 ~ 24657836 (+)
G1355269 NA non-coding downstream 31353 24667593 ~ 24667950 (+)
G1355273 NA non-coding downstream 45676 24681414 ~ 24684055 (+)
G1355304 NA non-coding downstream 104819 24741059 ~ 24741347 (+)
G1354681 rpl19 other upstream 531661 24085708 ~ 24090034 (+)
G1354668 NA other upstream 626674 23993618 ~ 23995021 (+)
LOC110491671 LOC106579157 other upstream 1133083 23430867 ~ 23488782 (+)
G1353660 NA other upstream 1322942 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 1495384 23123859 ~ 23134383 (+)
znf281b LOC106578343 other downstream 1440301 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 1668711 26283071 ~ 26314809 (+)

Expression


Co-expression Network