G1355304


Basic Information

Item Value
gene id G1355304
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24741059 ~ 24741347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1549239
gagtgtctagtttgagaaacagacgcttcacaagtcctcaactggcagcttcattaaatagtacccgcaaaacaccagtctcaacgtcaacagtgaagagatcagaaatacagtgtagacattgttaatgtgaaGAGTTGCctcttcaacagtgaagaggggaCTCCGGGatgatggccttctaggcaaagttcCTCTGTCCGGtgtcttaatcttttctttttattggccagtctgagatatggatttttatttgcaactctgcctagaaggccagcatcccggagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1549239 True 289 lncRNA 0.45 1 24741059 24741347

Neighbor

gene id symbol gene type direction distance location
coasy coasy coding upstream 40464 24684930 ~ 24700595 (+)
LOC110491698 LOC106579132 coding upstream 60266 24670341 ~ 24681115 (+)
naglu naglu coding upstream 96038 24626682 ~ 24645022 (+)
LOC110491695 NA coding upstream 133848 24606064 ~ 24607211 (+)
LOC110491694 atp6v0a1 coding upstream 138381 24562785 ~ 24602678 (+)
pus3 pus3 coding downstream 8761 24750108 ~ 24759143 (+)
dcakd dcakd coding downstream 23260 24764607 ~ 24783513 (+)
LOC110491705 ud2a2 coding downstream 84816 24826163 ~ 24829318 (+)
ccr10 LOC106579362 coding downstream 116165 24857512 ~ 24861130 (+)
ifn5 cd79b coding downstream 147754 24889101 ~ 24897741 (+)
G1355273 NA non-coding upstream 57004 24681414 ~ 24684055 (+)
G1355269 NA non-coding upstream 73109 24667593 ~ 24667950 (+)
G1355100 NA non-coding upstream 83223 24657517 ~ 24657836 (+)
G1355097 NA non-coding upstream 84251 24602897 ~ 24656808 (+)
G1355305 NA non-coding downstream 8 24741355 ~ 24741580 (+)
G1355352 NA non-coding downstream 123707 24865054 ~ 24870076 (+)
G1355356 NA non-coding downstream 129613 24870960 ~ 24871288 (+)
G1355357 NA non-coding downstream 130682 24872029 ~ 24872612 (+)
G1354681 rpl19 other upstream 651025 24085708 ~ 24090034 (+)
G1354668 NA other upstream 746038 23993618 ~ 23995021 (+)
LOC110491671 LOC106579157 other upstream 1252447 23430867 ~ 23488782 (+)
znf281b LOC106578343 other downstream 1335194 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 1563604 26283071 ~ 26314809 (+)
G1358292 NA other downstream 2587964 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 2819800 27561141 ~ 27595350 (+)

Expression


Co-expression Network