Gene
RNA
| Item | Value |
|---|---|
| gene id | G1355352 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 24865054 ~ 24870076 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1549289 | False | 372 | lncRNA | 0.47 | 2 | 24865054 | 24870076 |
| TU1549290 | True | 375 | lncRNA | 0.47 | 2 | 24865054 | 24870076 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccr10 | LOC106579362 | coding | upstream | 3924 | 24857512 ~ 24861130 (+) |
| LOC110491705 | ud2a2 | coding | upstream | 35736 | 24826163 ~ 24829318 (+) |
| dcakd | dcakd | coding | upstream | 81541 | 24764607 ~ 24783513 (+) |
| pus3 | pus3 | coding | upstream | 107811 | 24750108 ~ 24759143 (+) |
| coasy | coasy | coding | upstream | 164459 | 24684930 ~ 24700595 (+) |
| ifn5 | cd79b | coding | downstream | 19025 | 24889101 ~ 24897741 (+) |
| trnaa-ugc-127 | NA | coding | downstream | 161253 | 25031329 ~ 25031399 (+) |
| mapta | NA | coding | downstream | 175616 | 25045692 ~ 25092985 (+) |
| LOC110491714 | LOC106579122 | coding | downstream | 295310 | 25165386 ~ 25191533 (+) |
| zdhhc6 | zdhhc6 | coding | downstream | 332345 | 25202421 ~ 25213711 (+) |
| G1355305 | NA | non-coding | upstream | 123474 | 24741355 ~ 24741580 (+) |
| G1355304 | NA | non-coding | upstream | 123707 | 24741059 ~ 24741347 (+) |
| G1355273 | NA | non-coding | upstream | 180999 | 24681414 ~ 24684055 (+) |
| G1355269 | NA | non-coding | upstream | 197104 | 24667593 ~ 24667950 (+) |
| G1355356 | NA | non-coding | downstream | 884 | 24870960 ~ 24871288 (+) |
| G1355357 | NA | non-coding | downstream | 1953 | 24872029 ~ 24872612 (+) |
| G1355366 | NA | non-coding | downstream | 10752 | 24880828 ~ 24881093 (+) |
| G1355377 | NA | non-coding | downstream | 30975 | 24901051 ~ 24901362 (+) |
| LOC110491698 | LOC106579132 | other | upstream | 183939 | 24670341 ~ 24681115 (+) |
| G1354681 | rpl19 | other | upstream | 775020 | 24085708 ~ 24090034 (+) |
| G1354668 | NA | other | upstream | 870033 | 23993618 ~ 23995021 (+) |
| znf281b | LOC106578343 | other | downstream | 1206465 | 26076461 ~ 26107407 (+) |
| mpp3b | LOC106579097 | other | downstream | 1434875 | 26283071 ~ 26314809 (+) |
| G1358292 | NA | other | downstream | 2459235 | 27329311 ~ 27332275 (+) |
| LOC110491768 | LOC106579066 | other | downstream | 2691071 | 27561141 ~ 27595350 (+) |
| LOC110491776 | LOC106579398 | other | downstream | 3032974 | 27902972 ~ 27986259 (+) |
