G1355377


Basic Information

Item Value
gene id G1355377
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24901051 ~ 24901362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1549317
gcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttattttttaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaaaacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggttctgtatttggctccttccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccacc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1549317 True 312 lncRNA 0.42 1 24901051 24901362

Neighbor

gene id symbol gene type direction distance location
ifn5 cd79b coding upstream 8380 24889101 ~ 24897741 (+)
ccr10 LOC106579362 coding upstream 39921 24857512 ~ 24861130 (+)
LOC110491705 ud2a2 coding upstream 71733 24826163 ~ 24829318 (+)
dcakd dcakd coding upstream 117538 24764607 ~ 24783513 (+)
pus3 pus3 coding upstream 143808 24750108 ~ 24759143 (+)
trnaa-ugc-127 NA coding downstream 129967 25031329 ~ 25031399 (+)
mapta NA coding downstream 144330 25045692 ~ 25092985 (+)
LOC110491714 LOC106579122 coding downstream 264024 25165386 ~ 25191533 (+)
zdhhc6 zdhhc6 coding downstream 301059 25202421 ~ 25213711 (+)
gucy2g LOC106579347 coding downstream 429052 25330414 ~ 25367122 (+)
G1355366 NA non-coding upstream 19958 24880828 ~ 24881093 (+)
G1355357 NA non-coding upstream 28439 24872029 ~ 24872612 (+)
G1355356 NA non-coding upstream 29763 24870960 ~ 24871288 (+)
G1355352 NA non-coding upstream 30975 24865054 ~ 24870076 (+)
G1355394 scn4a non-coding downstream 37426 24938788 ~ 24939064 (+)
G1355435 NA non-coding downstream 100277 25001639 ~ 25002613 (+)
G1355443 NA non-coding downstream 109650 25011012 ~ 25011482 (+)
G1355446 NA non-coding downstream 114856 25016218 ~ 25016540 (+)
G1355449 NA non-coding downstream 122392 25023754 ~ 25024012 (+)
G1355273 NA other upstream 217132 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 219936 24670341 ~ 24681115 (+)
G1354681 rpl19 other upstream 811017 24085708 ~ 24090034 (+)
G1354668 NA other upstream 906030 23993618 ~ 23995021 (+)
znf281b LOC106578343 other downstream 1175179 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 1403589 26283071 ~ 26314809 (+)
G1358292 NA other downstream 2427949 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 2659785 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 3001688 27902972 ~ 27986259 (+)

Expression


Co-expression Network