G1355435


Basic Information

Item Value
gene id G1355435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 25001639 ~ 25002613 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1549379
tttaagaggctcctctgtcctccactcgttacctgtattaatgtcacctgtttgaacttgttatcagtataaaagacacctgtccacaacctcaaacagtcacactccaaactccactattgccaagaccaaagagctgtcaaaggacaccagaaacaaaattgtagacctgcaccaggctgggaagactgaatctgcaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatggaagacaaacaagaccactgataatctccctcgatctggggctccacgcaagatctcaccccgtggggtcaaaatgatcacaagaatggtgagcaataatcccagaaccacacggggggacctagtgaatgacctgcagagagctgggaccaaagtaacaaagcctaccatcagcaagggcattgaagatgaaacgtggctgggtctttcagcatgacaatgatcccaaacacaccgcccggtcaacgaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1549379 True 600 lncRNA 0.47 2 25001639 25002613

Neighbor

gene id symbol gene type direction distance location
ifn5 cd79b coding upstream 108968 24889101 ~ 24897741 (+)
ccr10 LOC106579362 coding upstream 140509 24857512 ~ 24861130 (+)
LOC110491705 ud2a2 coding upstream 172321 24826163 ~ 24829318 (+)
dcakd dcakd coding upstream 218126 24764607 ~ 24783513 (+)
pus3 pus3 coding upstream 244396 24750108 ~ 24759143 (+)
trnaa-ugc-127 NA coding downstream 28716 25031329 ~ 25031399 (+)
mapta NA coding downstream 43079 25045692 ~ 25092985 (+)
LOC110491714 LOC106579122 coding downstream 162773 25165386 ~ 25191533 (+)
zdhhc6 zdhhc6 coding downstream 199808 25202421 ~ 25213711 (+)
gucy2g LOC106579347 coding downstream 327801 25330414 ~ 25367122 (+)
G1355394 scn4a non-coding upstream 62575 24938788 ~ 24939064 (+)
G1355377 NA non-coding upstream 100277 24901051 ~ 24901362 (+)
G1355366 NA non-coding upstream 120546 24880828 ~ 24881093 (+)
G1355357 NA non-coding upstream 129027 24872029 ~ 24872612 (+)
G1355443 NA non-coding downstream 8399 25011012 ~ 25011482 (+)
G1355446 NA non-coding downstream 13605 25016218 ~ 25016540 (+)
G1355449 NA non-coding downstream 21141 25023754 ~ 25024012 (+)
G1355498 NA non-coding downstream 111572 25114185 ~ 25114792 (+)
G1355500 NA non-coding downstream 113977 25116590 ~ 25116821 (+)
G1355273 NA other upstream 317720 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 320524 24670341 ~ 24681115 (+)
G1354681 rpl19 other upstream 911605 24085708 ~ 24090034 (+)
G1354668 NA other upstream 1006618 23993618 ~ 23995021 (+)
znf281b LOC106578343 other downstream 1073928 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 1302338 26283071 ~ 26314809 (+)
G1358292 NA other downstream 2326698 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 2558534 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 2900437 27902972 ~ 27986259 (+)

Expression


Co-expression Network