Gene
RNA
| Item | Value |
|---|---|
| gene id | G1355449 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 25023754 ~ 25024012 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1549393 | True | 259 | lncRNA | 0.37 | 1 | 25023754 | 25024012 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ifn5 | cd79b | coding | upstream | 131083 | 24889101 ~ 24897741 (+) |
| ccr10 | LOC106579362 | coding | upstream | 162624 | 24857512 ~ 24861130 (+) |
| LOC110491705 | ud2a2 | coding | upstream | 194436 | 24826163 ~ 24829318 (+) |
| dcakd | dcakd | coding | upstream | 240241 | 24764607 ~ 24783513 (+) |
| pus3 | pus3 | coding | upstream | 266511 | 24750108 ~ 24759143 (+) |
| trnaa-ugc-127 | NA | coding | downstream | 7317 | 25031329 ~ 25031399 (+) |
| mapta | NA | coding | downstream | 21680 | 25045692 ~ 25092985 (+) |
| LOC110491714 | LOC106579122 | coding | downstream | 141374 | 25165386 ~ 25191533 (+) |
| zdhhc6 | zdhhc6 | coding | downstream | 178409 | 25202421 ~ 25213711 (+) |
| gucy2g | LOC106579347 | coding | downstream | 306402 | 25330414 ~ 25367122 (+) |
| G1355446 | NA | non-coding | upstream | 7214 | 25016218 ~ 25016540 (+) |
| G1355443 | NA | non-coding | upstream | 12272 | 25011012 ~ 25011482 (+) |
| G1355435 | NA | non-coding | upstream | 21141 | 25001639 ~ 25002613 (+) |
| G1355394 | scn4a | non-coding | upstream | 84690 | 24938788 ~ 24939064 (+) |
| G1355377 | NA | non-coding | upstream | 122392 | 24901051 ~ 24901362 (+) |
| G1355498 | NA | non-coding | downstream | 90173 | 25114185 ~ 25114792 (+) |
| G1355500 | NA | non-coding | downstream | 92578 | 25116590 ~ 25116821 (+) |
| G1355503 | NA | non-coding | downstream | 95264 | 25119276 ~ 25119698 (+) |
| G1355526 | NA | non-coding | downstream | 132577 | 25156589 ~ 25156825 (+) |
| G1355527 | NA | non-coding | downstream | 133215 | 25157227 ~ 25158048 (+) |
| G1355273 | NA | other | upstream | 339835 | 24681414 ~ 24684055 (+) |
| LOC110491698 | LOC106579132 | other | upstream | 342639 | 24670341 ~ 24681115 (+) |
| G1354681 | rpl19 | other | upstream | 933720 | 24085708 ~ 24090034 (+) |
| G1354668 | NA | other | upstream | 1028733 | 23993618 ~ 23995021 (+) |
| znf281b | LOC106578343 | other | downstream | 1052529 | 26076461 ~ 26107407 (+) |
| mpp3b | LOC106579097 | other | downstream | 1280939 | 26283071 ~ 26314809 (+) |
| G1358292 | NA | other | downstream | 2305299 | 27329311 ~ 27332275 (+) |
| LOC110491768 | LOC106579066 | other | downstream | 2537135 | 27561141 ~ 27595350 (+) |
| LOC110491776 | LOC106579398 | other | downstream | 2879038 | 27902972 ~ 27986259 (+) |
