G1355498


Basic Information

Item Value
gene id G1355498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 25114185 ~ 25114792 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1549446
gctactACTTTGtgttcttggctgtgtgcttagggtcgttgtcctgttggaagatgtaCCGTCgtcccagtcggaggtcctgagcgctctggagcaggttttcatcaaggatctcagtacttatctttccctcgatcctgaccagtctcccagtccctgaaaaacatccccacagcatgctgctgctGCCGCCACACTTTACCGTGcagatggtgctaggtttcctccagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1549446 True 232 lncRNA 0.53 2 25114185 25114792

Neighbor

gene id symbol gene type direction distance location
mapta NA coding upstream 21200 25045692 ~ 25092985 (+)
trnaa-ugc-127 NA coding upstream 82786 25031329 ~ 25031399 (+)
ifn5 cd79b coding upstream 221514 24889101 ~ 24897741 (+)
ccr10 LOC106579362 coding upstream 253055 24857512 ~ 24861130 (+)
LOC110491705 ud2a2 coding upstream 284867 24826163 ~ 24829318 (+)
LOC110491714 LOC106579122 coding downstream 50594 25165386 ~ 25191533 (+)
zdhhc6 zdhhc6 coding downstream 87629 25202421 ~ 25213711 (+)
gucy2g LOC106579347 coding downstream 215622 25330414 ~ 25367122 (+)
plxdc1 LOC106579118 coding downstream 319318 25434110 ~ 25527003 (+)
LOC110491720 lasp1 coding downstream 442475 25557267 ~ 25592916 (+)
G1355449 NA non-coding upstream 90173 25023754 ~ 25024012 (+)
G1355446 NA non-coding upstream 97645 25016218 ~ 25016540 (+)
G1355443 NA non-coding upstream 102703 25011012 ~ 25011482 (+)
G1355435 NA non-coding upstream 111572 25001639 ~ 25002613 (+)
G1355394 scn4a non-coding upstream 175121 24938788 ~ 24939064 (+)
G1355500 NA non-coding downstream 1798 25116590 ~ 25116821 (+)
G1355503 NA non-coding downstream 4484 25119276 ~ 25119698 (+)
G1355526 NA non-coding downstream 41797 25156589 ~ 25156825 (+)
G1355527 NA non-coding downstream 42435 25157227 ~ 25158048 (+)
G1355552 acsl5 non-coding downstream 101998 25216790 ~ 25226546 (+)
dcakd dcakd other upstream 330673 24764607 ~ 24783513 (+)
G1355273 NA other upstream 430266 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 433070 24670341 ~ 24681115 (+)
G1354681 rpl19 other upstream 1024151 24085708 ~ 24090034 (+)
G1354668 NA other upstream 1119164 23993618 ~ 23995021 (+)
znf281b LOC106578343 other downstream 961749 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 1190159 26283071 ~ 26314809 (+)
G1358292 NA other downstream 2214519 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 2446355 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 2788258 27902972 ~ 27986259 (+)

Expression


Co-expression Network