G1355526


Basic Information

Item Value
gene id G1355526
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 25156589 ~ 25156825 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1549475
caacattatttgggttcAACAATTATTGAATAATGATGGACAACTATATGATTATCCAGTATTTATGAGAACACACAATGTTACATTCACTCCTGAAGAGTATCAAtctgttgttagagctgtccctaaaggtgctaTTCTTCTTTTAGGAAAATATAACACTACTCCAAGTGAAACTATTGAGGAATTTGTAGCCTCAATACAATTAGAAGGAattgacattttaaactataaatg

Function

NR:

description
uncharacterized protein LOC110017123

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1549475 True 237 lncRNA 0.31 1 25156589 25156825

Neighbor

gene id symbol gene type direction distance location
mapta NA coding upstream 63604 25045692 ~ 25092985 (+)
trnaa-ugc-127 NA coding upstream 125190 25031329 ~ 25031399 (+)
ifn5 cd79b coding upstream 263918 24889101 ~ 24897741 (+)
ccr10 LOC106579362 coding upstream 295459 24857512 ~ 24861130 (+)
LOC110491705 ud2a2 coding upstream 327271 24826163 ~ 24829318 (+)
LOC110491714 LOC106579122 coding downstream 8561 25165386 ~ 25191533 (+)
zdhhc6 zdhhc6 coding downstream 45596 25202421 ~ 25213711 (+)
gucy2g LOC106579347 coding downstream 173589 25330414 ~ 25367122 (+)
plxdc1 LOC106579118 coding downstream 277285 25434110 ~ 25527003 (+)
LOC110491720 lasp1 coding downstream 400442 25557267 ~ 25592916 (+)
G1355503 NA non-coding upstream 36891 25119276 ~ 25119698 (+)
G1355500 NA non-coding upstream 39768 25116590 ~ 25116821 (+)
G1355498 NA non-coding upstream 41797 25114185 ~ 25114792 (+)
G1355449 NA non-coding upstream 132577 25023754 ~ 25024012 (+)
G1355446 NA non-coding upstream 140049 25016218 ~ 25016540 (+)
G1355527 NA non-coding downstream 402 25157227 ~ 25158048 (+)
G1355552 acsl5 non-coding downstream 59965 25216790 ~ 25226546 (+)
G1355575 NA non-coding downstream 104408 25261233 ~ 25261451 (+)
G1356094 NA non-coding downstream 133880 25290705 ~ 25290936 (+)
G1356111 NA non-coding downstream 147443 25304268 ~ 25304525 (+)
dcakd dcakd other upstream 373077 24764607 ~ 24783513 (+)
G1355273 NA other upstream 472670 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 475474 24670341 ~ 24681115 (+)
G1354681 rpl19 other upstream 1066555 24085708 ~ 24090034 (+)
G1354668 NA other upstream 1161568 23993618 ~ 23995021 (+)
znf281b LOC106578343 other downstream 919716 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 1148126 26283071 ~ 26314809 (+)
G1358292 NA other downstream 2172486 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 2404322 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 2746225 27902972 ~ 27986259 (+)

Expression


Co-expression Network