G1355575


Basic Information

Item Value
gene id G1355575
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 25261233 ~ 25261451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1549528
aggtaatgttgcctactttcaccacctggggggcggcccatcagaaagttcaggatccagttgcatagggaggagttTAGAGCCAGGGCCGTGAGCTTTGTAATGAGCTTatagggcactatggtattgaaagtgaagctgtagtcgatgaacacatatgcattccttttgtccaggtgggtaagTTCAGTGTGCTGTTTAATAGCGATTGCGTTGTCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1549528 True 219 lncRNA 0.48 1 25261233 25261451

Neighbor

gene id symbol gene type direction distance location
zdhhc6 zdhhc6 coding upstream 47522 25202421 ~ 25213711 (+)
LOC110491714 LOC106579122 coding upstream 69700 25165386 ~ 25191533 (+)
mapta NA coding upstream 168248 25045692 ~ 25092985 (+)
trnaa-ugc-127 NA coding upstream 229834 25031329 ~ 25031399 (+)
ifn5 cd79b coding upstream 368562 24889101 ~ 24897741 (+)
gucy2g LOC106579347 coding downstream 68963 25330414 ~ 25367122 (+)
plxdc1 LOC106579118 coding downstream 172659 25434110 ~ 25527003 (+)
LOC110491720 lasp1 coding downstream 295816 25557267 ~ 25592916 (+)
arhgap23b LOC106579110 coding downstream 369760 25631211 ~ 25702729 (+)
plcd3b LOC106579107 coding downstream 456857 25718308 ~ 25765325 (+)
G1355552 acsl5 non-coding upstream 34687 25216790 ~ 25226546 (+)
G1355527 NA non-coding upstream 103185 25157227 ~ 25158048 (+)
G1355526 NA non-coding upstream 104408 25156589 ~ 25156825 (+)
G1355503 NA non-coding upstream 141535 25119276 ~ 25119698 (+)
G1355500 NA non-coding upstream 144412 25116590 ~ 25116821 (+)
G1356094 NA non-coding downstream 29254 25290705 ~ 25290936 (+)
G1356111 NA non-coding downstream 42817 25304268 ~ 25304525 (+)
G1356272 NA non-coding downstream 342794 25604245 ~ 25604577 (+)
G1356395 NA non-coding downstream 522395 25783846 ~ 25784196 (+)
G1356665 LOC106611498 non-coding downstream 526262 25787713 ~ 25787971 (+)
dcakd dcakd other upstream 477721 24764607 ~ 24783513 (+)
G1355273 NA other upstream 577314 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 580118 24670341 ~ 24681115 (+)
G1354681 rpl19 other upstream 1171199 24085708 ~ 24090034 (+)
G1354668 NA other upstream 1266212 23993618 ~ 23995021 (+)
znf281b LOC106578343 other downstream 815090 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 1043500 26283071 ~ 26314809 (+)
G1358292 NA other downstream 2067860 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 2299696 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 2641599 27902972 ~ 27986259 (+)

Expression


Co-expression Network