G1356111


Basic Information

Item Value
gene id G1356111
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 25304268 ~ 25304525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1550102
aacgccctaacaaaaggagctatttggacataaattatgaactttatcgaacaaatcaaacagttattgtggaactgggattcctgggggtgcattctgatgaagatcatcaaaggtaagtgaatattcataatgttatttctgacttctgttgactgcacaatatggcggatatatttttggcttgtttggtctctgagcgccgtactcagattattgcatggtatgctttttccgtaaagtttttttaaatctgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1550102 True 258 lncRNA 0.37 1 25304268 25304525

Neighbor

gene id symbol gene type direction distance location
zdhhc6 zdhhc6 coding upstream 90557 25202421 ~ 25213711 (+)
LOC110491714 LOC106579122 coding upstream 112735 25165386 ~ 25191533 (+)
mapta NA coding upstream 211283 25045692 ~ 25092985 (+)
trnaa-ugc-127 NA coding upstream 272869 25031329 ~ 25031399 (+)
ifn5 cd79b coding upstream 411597 24889101 ~ 24897741 (+)
gucy2g LOC106579347 coding downstream 25889 25330414 ~ 25367122 (+)
plxdc1 LOC106579118 coding downstream 129585 25434110 ~ 25527003 (+)
LOC110491720 lasp1 coding downstream 252742 25557267 ~ 25592916 (+)
arhgap23b LOC106579110 coding downstream 326686 25631211 ~ 25702729 (+)
plcd3b LOC106579107 coding downstream 413783 25718308 ~ 25765325 (+)
G1356094 NA non-coding upstream 13332 25290705 ~ 25290936 (+)
G1355575 NA non-coding upstream 42817 25261233 ~ 25261451 (+)
G1355552 acsl5 non-coding upstream 77722 25216790 ~ 25226546 (+)
G1355527 NA non-coding upstream 146220 25157227 ~ 25158048 (+)
G1355526 NA non-coding upstream 147443 25156589 ~ 25156825 (+)
G1356272 NA non-coding downstream 299720 25604245 ~ 25604577 (+)
G1356395 NA non-coding downstream 479321 25783846 ~ 25784196 (+)
G1356665 LOC106611498 non-coding downstream 483188 25787713 ~ 25787971 (+)
G1356754 NA non-coding downstream 649367 25953892 ~ 25954148 (+)
G1356755 NA non-coding downstream 650310 25954835 ~ 25955064 (+)
dcakd dcakd other upstream 520756 24764607 ~ 24783513 (+)
G1355273 NA other upstream 620349 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 623153 24670341 ~ 24681115 (+)
G1354681 rpl19 other upstream 1214234 24085708 ~ 24090034 (+)
G1354668 NA other upstream 1309247 23993618 ~ 23995021 (+)
znf281b LOC106578343 other downstream 772016 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 1000426 26283071 ~ 26314809 (+)
G1358292 NA other downstream 2024786 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 2256622 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 2598525 27902972 ~ 27986259 (+)

Expression


Co-expression Network