G1356272


Basic Information

Item Value
gene id G1356272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 25604245 ~ 25604577 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1550282
GCCCGGGCaaagaaggagtggctttgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtccgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctgcatggaggaatgggccaaaataccagcaacagtgtgtgaaaacctattgagataaacttttgttattgaccagatacttattttccacaataatttgcaaataaattcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1550282 True 271 lncRNA 0.44 2 25604245 25604577

Neighbor

gene id symbol gene type direction distance location
LOC110491720 lasp1 coding upstream 11329 25557267 ~ 25592916 (+)
plxdc1 LOC106579118 coding upstream 77242 25434110 ~ 25527003 (+)
gucy2g LOC106579347 coding upstream 237123 25330414 ~ 25367122 (+)
zdhhc6 zdhhc6 coding upstream 390534 25202421 ~ 25213711 (+)
LOC110491714 LOC106579122 coding upstream 412712 25165386 ~ 25191533 (+)
arhgap23b LOC106579110 coding downstream 26634 25631211 ~ 25702729 (+)
plcd3b LOC106579107 coding downstream 113731 25718308 ~ 25765325 (+)
nmt1b LOC106579105 coding downstream 170093 25774670 ~ 25780246 (+)
svild LOC106579103 coding downstream 191396 25795973 ~ 25907006 (+)
znf281b LOC106578343 coding downstream 471884 26076461 ~ 26107407 (+)
G1356111 NA non-coding upstream 299720 25304268 ~ 25304525 (+)
G1356094 NA non-coding upstream 313309 25290705 ~ 25290936 (+)
G1355575 NA non-coding upstream 342794 25261233 ~ 25261451 (+)
G1355552 acsl5 non-coding upstream 377699 25216790 ~ 25226546 (+)
G1355527 NA non-coding upstream 446197 25157227 ~ 25158048 (+)
G1356395 NA non-coding downstream 179269 25783846 ~ 25784196 (+)
G1356665 LOC106611498 non-coding downstream 183136 25787713 ~ 25787971 (+)
G1356754 NA non-coding downstream 349315 25953892 ~ 25954148 (+)
G1356755 NA non-coding downstream 350258 25954835 ~ 25955064 (+)
G1356780 NA non-coding downstream 399861 26004438 ~ 26069048 (+)
dcakd dcakd other upstream 820733 24764607 ~ 24783513 (+)
G1355273 NA other upstream 920326 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 923130 24670341 ~ 24681115 (+)
G1354681 rpl19 other upstream 1514211 24085708 ~ 24090034 (+)
G1354668 NA other upstream 1609224 23993618 ~ 23995021 (+)
mpp3b LOC106579097 other downstream 700374 26283071 ~ 26314809 (+)
G1358292 NA other downstream 1724734 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 1956570 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 2298473 27902972 ~ 27986259 (+)

Expression


Co-expression Network