Gene
RNA
| Item | Value |
|---|---|
| gene id | G1356754 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 25953892 ~ 25954148 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1550817 | True | 257 | lncRNA | 0.54 | 1 | 25953892 | 25954148 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| svild | LOC106579103 | coding | upstream | 46886 | 25795973 ~ 25907006 (+) |
| nmt1b | LOC106579105 | coding | upstream | 173646 | 25774670 ~ 25780246 (+) |
| plcd3b | LOC106579107 | coding | upstream | 188567 | 25718308 ~ 25765325 (+) |
| arhgap23b | LOC106579110 | coding | upstream | 251163 | 25631211 ~ 25702729 (+) |
| LOC110491720 | lasp1 | coding | upstream | 360976 | 25557267 ~ 25592916 (+) |
| znf281b | LOC106578343 | coding | downstream | 122313 | 26076461 ~ 26107407 (+) |
| muc13b | LOC106579100 | coding | downstream | 178845 | 26132993 ~ 26166321 (+) |
| lrp2b | LOC106579098 | coding | downstream | 232667 | 26186815 ~ 26281363 (+) |
| mpp3b | LOC106579097 | coding | downstream | 328923 | 26283071 ~ 26314809 (+) |
| ngfrb | LOC106579090 | coding | downstream | 540890 | 26495038 ~ 26577153 (+) |
| G1356665 | LOC106611498 | non-coding | upstream | 165921 | 25787713 ~ 25787971 (+) |
| G1356395 | NA | non-coding | upstream | 169696 | 25783846 ~ 25784196 (+) |
| G1356272 | NA | non-coding | upstream | 349315 | 25604245 ~ 25604577 (+) |
| G1356111 | NA | non-coding | upstream | 649367 | 25304268 ~ 25304525 (+) |
| G1356094 | NA | non-coding | upstream | 662956 | 25290705 ~ 25290936 (+) |
| G1356755 | NA | non-coding | downstream | 687 | 25954835 ~ 25955064 (+) |
| G1356780 | NA | non-coding | downstream | 50290 | 26004438 ~ 26069048 (+) |
| G1356917 | NA | non-coding | downstream | 282418 | 26236566 ~ 26243680 (+) |
| G1357249 | NA | non-coding | downstream | 328093 | 26282241 ~ 26282589 (+) |
| dcakd | dcakd | other | upstream | 1170380 | 24764607 ~ 24783513 (+) |
| G1355273 | NA | other | upstream | 1269973 | 24681414 ~ 24684055 (+) |
| LOC110491698 | LOC106579132 | other | upstream | 1272777 | 24670341 ~ 24681115 (+) |
| G1354681 | rpl19 | other | upstream | 1863858 | 24085708 ~ 24090034 (+) |
| G1354668 | NA | other | upstream | 1958871 | 23993618 ~ 23995021 (+) |
| G1358292 | NA | other | downstream | 1375163 | 27329311 ~ 27332275 (+) |
| LOC110491768 | LOC106579066 | other | downstream | 1606999 | 27561141 ~ 27595350 (+) |
| LOC110491776 | LOC106579398 | other | downstream | 1948902 | 27902972 ~ 27986259 (+) |
