G1357249


Basic Information

Item Value
gene id G1357249
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 26282241 ~ 26282589 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1551390
aatcctctgtggaaagggttctacctggaaacccCAAAaattatacctggaaccaaaagggttcttcaaagggttatcctatgagtGTAGGgcactaaaagagagagagggagtagatggAGGACAGAGTGGTTGGTTAAGGGATAAGTGGAGTGATGGTGCGGTGATGGAagagtggagggatggggggCAGAAAAGGAGTGAAGTAGGGGGACTGGTAAATTTAGAACcataaaggtgctatctagaatctaaaagggtttttaggctgtccccataggagaaccctttgaagaaccctttttatttccaggtagaacccttttggttccaggtagaaccctttggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1551390 True 349 lncRNA 0.46 1 26282241 26282589

Neighbor

gene id symbol gene type direction distance location
lrp2b LOC106579098 coding upstream 884 26186815 ~ 26281363 (+)
muc13b LOC106579100 coding upstream 115920 26132993 ~ 26166321 (+)
znf281b LOC106578343 coding upstream 174834 26076461 ~ 26107407 (+)
svild LOC106579103 coding upstream 375235 25795973 ~ 25907006 (+)
nmt1b LOC106579105 coding upstream 501995 25774670 ~ 25780246 (+)
mpp3b LOC106579097 coding downstream 482 26283071 ~ 26314809 (+)
ngfrb LOC106579090 coding downstream 212449 26495038 ~ 26577153 (+)
LOC110492861 LOC106579084 coding downstream 712040 26994629 ~ 26998355 (+)
LOC110492862 kcnh6 coding downstream 735503 27018092 ~ 27045515 (+)
LOC110492891 NA coding downstream 815680 27098269 ~ 27099220 (+)
G1356917 NA non-coding upstream 38561 26236566 ~ 26243680 (+)
G1356780 NA non-coding upstream 213193 26004438 ~ 26069048 (+)
G1356755 NA non-coding upstream 327177 25954835 ~ 25955064 (+)
G1356754 NA non-coding upstream 328093 25953892 ~ 25954148 (+)
G1357264 NA non-coding downstream 35605 26318194 ~ 26318579 (+)
G1357262 LOC106579096 non-coding downstream 57898 26340487 ~ 26342375 (+)
G1357276 NA non-coding downstream 61030 26343619 ~ 26343910 (+)
G1357278 NA non-coding downstream 62439 26345028 ~ 26345262 (+)
dcakd dcakd other upstream 1498729 24764607 ~ 24783513 (+)
G1355273 NA other upstream 1598322 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 1601126 24670341 ~ 24681115 (+)
G1354681 rpl19 other upstream 2192207 24085708 ~ 24090034 (+)
G1358292 NA other downstream 1046722 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 1278558 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 1620461 27902972 ~ 27986259 (+)
G1358698 kif22 other downstream 1764093 28046682 ~ 28047390 (+)

Expression


Co-expression Network