G1357988


Basic Information

Item Value
gene id G1357988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 26910539 ~ 26910870 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1552191
gcctatttccaaactttttaacctgtctttcctttctggggaggtttcCATTGCTAGGAAGGCACCCAcagttcgtcctttatttaaagggggagatcaagctgatcctaactgttataggcatatttctgttttgccctgtatattaaaagtgttggaaaaacttgtcaataatcaattgactggctttcttgatgtatATACagggccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1552191 True 332 lncRNA 0.39 1 26910539 26910870

Neighbor

gene id symbol gene type direction distance location
ngfrb LOC106579090 coding upstream 333386 26495038 ~ 26577153 (+)
mpp3b LOC106579097 coding upstream 595730 26283071 ~ 26314809 (+)
lrp2b LOC106579098 coding upstream 629182 26186815 ~ 26281363 (+)
muc13b LOC106579100 coding upstream 744218 26132993 ~ 26166321 (+)
znf281b LOC106578343 coding upstream 803132 26076461 ~ 26107407 (+)
LOC110492861 LOC106579084 coding downstream 83759 26994629 ~ 26998355 (+)
LOC110492862 kcnh6 coding downstream 107222 27018092 ~ 27045515 (+)
LOC110492891 NA coding downstream 187399 27098269 ~ 27099220 (+)
LOC110491761 tceb2 coding downstream 421960 27332830 ~ 27359591 (+)
LOC110491760 tgfi1 coding downstream 449683 27360553 ~ 27382020 (+)
G1357955 NA non-coding upstream 1907 26908199 ~ 26908632 (+)
G1357952 NA non-coding upstream 3768 26906550 ~ 26906771 (+)
G1357924 NA non-coding upstream 37389 26871278 ~ 26873150 (+)
G1357777 NA non-coding upstream 119010 26790836 ~ 26791529 (+)
G1357742 NA non-coding upstream 180523 26729455 ~ 26730016 (+)
G1358017 NA non-coding downstream 58876 26969746 ~ 26969968 (+)
G1358020 NA non-coding downstream 63042 26973912 ~ 26974117 (+)
G1358025 NA non-coding downstream 72290 26983160 ~ 26983397 (+)
G1358030 NA non-coding downstream 80233 26991103 ~ 26991302 (+)
G1357997 NA non-coding downstream 82327 26993197 ~ 26994029 (+)
dcakd dcakd other upstream 2127027 24764607 ~ 24783513 (+)
G1355273 NA other upstream 2226620 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 2229424 24670341 ~ 24681115 (+)
G1358292 NA other downstream 418441 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 650277 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 992180 27902972 ~ 27986259 (+)
G1358698 kif22 other downstream 1135812 28046682 ~ 28047390 (+)
G1361207 NA other downstream 2891784 29802654 ~ 29804368 (+)

Expression


Co-expression Network