Gene
RNA
| Item | Value |
|---|---|
| gene id | G1358142 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 27095249 ~ 27102678 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1552355 | True | 447 | lncRNA | 0.44 | 2 | 27095249 | 27102678 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492862 | kcnh6 | coding | upstream | 49734 | 27018092 ~ 27045515 (+) |
| LOC110492861 | LOC106579084 | coding | upstream | 96894 | 26994629 ~ 26998355 (+) |
| ngfrb | LOC106579090 | coding | upstream | 518096 | 26495038 ~ 26577153 (+) |
| mpp3b | LOC106579097 | coding | upstream | 780440 | 26283071 ~ 26314809 (+) |
| lrp2b | LOC106579098 | coding | upstream | 813892 | 26186815 ~ 26281363 (+) |
| LOC110491761 | tceb2 | coding | downstream | 230152 | 27332830 ~ 27359591 (+) |
| LOC110491760 | tgfi1 | coding | downstream | 257875 | 27360553 ~ 27382020 (+) |
| patl2 | patl2 | coding | downstream | 279601 | 27382279 ~ 27398868 (+) |
| cmn | LOC106579069 | coding | downstream | 328473 | 27431151 ~ 27500887 (+) |
| LOC110492863 | paqr4 | coding | downstream | 398653 | 27501331 ~ 27504634 (+) |
| G1358087 | NA | non-coding | upstream | 34732 | 27058400 ~ 27060517 (+) |
| G1358092 | NA | non-coding | upstream | 45379 | 27049504 ~ 27049870 (+) |
| G1358091 | NA | non-coding | upstream | 47391 | 27047079 ~ 27047858 (+) |
| G1357997 | NA | non-coding | upstream | 101220 | 26993197 ~ 26994029 (+) |
| G1358030 | NA | non-coding | upstream | 103947 | 26991103 ~ 26991302 (+) |
| G1358189 | NA | non-coding | downstream | 52349 | 27155027 ~ 27155424 (+) |
| G1358202 | NA | non-coding | downstream | 64349 | 27167027 ~ 27167288 (+) |
| G1358203 | NA | non-coding | downstream | 65368 | 27168046 ~ 27168390 (+) |
| G1358205 | NA | non-coding | downstream | 66783 | 27169461 ~ 27169683 (+) |
| G1358217 | NA | non-coding | downstream | 87804 | 27190482 ~ 27190718 (+) |
| znf281b | LOC106578343 | other | upstream | 1005866 | 26076461 ~ 26107407 (+) |
| dcakd | dcakd | other | upstream | 2311737 | 24764607 ~ 24783513 (+) |
| G1355273 | NA | other | upstream | 2411330 | 24681414 ~ 24684055 (+) |
| LOC110491698 | LOC106579132 | other | upstream | 2414134 | 24670341 ~ 24681115 (+) |
| G1358292 | NA | other | downstream | 226633 | 27329311 ~ 27332275 (+) |
| LOC110491768 | LOC106579066 | other | downstream | 458469 | 27561141 ~ 27595350 (+) |
| LOC110491776 | LOC106579398 | other | downstream | 800372 | 27902972 ~ 27986259 (+) |
| G1358698 | kif22 | other | downstream | 944004 | 28046682 ~ 28047390 (+) |
| G1361207 | NA | other | downstream | 2699976 | 29802654 ~ 29804368 (+) |
