G1358202



Basic Information


Item Value
gene id G1358202
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 27167027 ~ 27167288 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1552422
GTTTTTATATTATTCAAGCCATAGAATAAGGATTCCTTGAATGCCTGAACATTTACTGCTGAGTTGTATGTGAAaagaatataaactcagcaaaaaaagaaacatccctttttaaGGATGCTGGCTTTAAaatataattcgtaaaaatccaaagaaCTTCACAGAtcgtcattgtaaagggtttaaacactgtttcccatgcttgttcaatgaaccataaacaattaatgaacatgcacctgtggaacggttgatAAGACAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1552422 True 262 lncRNA 0.33 1 27167027 27167288

Neighbor


gene id symbol gene type direction distance location
LOC110492891 NA coding upstream 67807 27098269 ~ 27099220 (+)
LOC110492862 kcnh6 coding upstream 121512 27018092 ~ 27045515 (+)
LOC110492861 LOC106579084 coding upstream 168672 26994629 ~ 26998355 (+)
ngfrb LOC106579090 coding upstream 589874 26495038 ~ 26577153 (+)
mpp3b LOC106579097 coding upstream 852218 26283071 ~ 26314809 (+)
LOC110491761 tceb2 coding downstream 165542 27332830 ~ 27359591 (+)
LOC110491760 tgfi1 coding downstream 193265 27360553 ~ 27382020 (+)
patl2 patl2 coding downstream 214991 27382279 ~ 27398868 (+)
cmn LOC106579069 coding downstream 263863 27431151 ~ 27500887 (+)
LOC110492863 paqr4 coding downstream 334043 27501331 ~ 27504634 (+)
G1358189 NA non-coding upstream 11603 27155027 ~ 27155424 (+)
G1358143 NA non-coding upstream 63924 27095847 ~ 27103103 (+)
G1358142 NA non-coding upstream 64349 27095249 ~ 27102678 (+)
G1358087 NA non-coding upstream 106510 27058400 ~ 27060517 (+)
G1358092 NA non-coding upstream 117157 27049504 ~ 27049870 (+)
G1358203 NA non-coding downstream 758 27168046 ~ 27168390 (+)
G1358205 NA non-coding downstream 2173 27169461 ~ 27169683 (+)
G1358217 NA non-coding downstream 23194 27190482 ~ 27190718 (+)
G1358221 NA non-coding downstream 27176 27194464 ~ 27194671 (+)
G1358223 NA non-coding downstream 30743 27198031 ~ 27198246 (+)
znf281b LOC106578343 other upstream 1077644 26076461 ~ 26107407 (+)
dcakd dcakd other upstream 2383515 24764607 ~ 24783513 (+)
G1355273 NA other upstream 2483108 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 2485912 24670341 ~ 24681115 (+)
G1358292 NA other downstream 162023 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 393859 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 735762 27902972 ~ 27986259 (+)
G1358698 kif22 other downstream 879394 28046682 ~ 28047390 (+)
G1361207 NA other downstream 2635366 29802654 ~ 29804368 (+)

Expression



Co-expression Network