Gene
RNA
| Item | Value |
|---|---|
| gene id | G1359242 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 27197751 ~ 27198099 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1553590 | True | 349 | lncRNA | 0.39 | 1 | 27197751 | 27198099 |
27,194,800
27,195,200
27,195,600
27,196,000
27,196,400
27,196,800
27,197,200
27,197,600
27,198,000
27,198,400
27,198,800
27,199,200
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| erbb2 | erbb2 | coding | downstream | 46312 | 27114108 ~ 27151439 (-) |
| LOC110491753 | LOC105030232 | coding | downstream | 118869 | 27058399 ~ 27078882 (-) |
| LOC110491752 | LOC106579083 | coding | downstream | 195399 | 26998612 ~ 27002352 (-) |
| pth3r | LOC106579085 | coding | downstream | 203733 | 26936401 ~ 26994018 (-) |
| rundc3ab | LOC106579086 | coding | downstream | 293802 | 26858876 ~ 26903949 (-) |
| pgap3 | pgap3 | coding | upstream | 14408 | 27212507 ~ 27225167 (-) |
| mylpfb | LOC106579077 | coding | upstream | 28511 | 27226610 ~ 27254599 (-) |
| LOC110491757 | LOC106579075 | coding | upstream | 56622 | 27254721 ~ 27258975 (-) |
| LOC110491756 | LOC106579074 | coding | upstream | 68507 | 27266606 ~ 27280559 (-) |
| pkmyt1 | pkmyt1 | coding | upstream | 99235 | 27297334 ~ 27307880 (-) |
| G1359239 | NA | non-coding | downstream | 2820 | 27194712 ~ 27194931 (-) |
| G1359238 | NA | non-coding | downstream | 4288 | 27193162 ~ 27193463 (-) |
| G1359229 | NA | non-coding | downstream | 16322 | 27181223 ~ 27181429 (-) |
| G1359224 | NA | non-coding | downstream | 21866 | 27175638 ~ 27175885 (-) |
| G1359211 | NA | non-coding | downstream | 42287 | 27155049 ~ 27155464 (-) |
| G1359243 | NA | non-coding | upstream | 97 | 27198196 ~ 27198398 (-) |
| G1359276 | NA | non-coding | upstream | 136569 | 27334668 ~ 27336438 (-) |
| G1359274 | NA | non-coding | upstream | 140951 | 27339050 ~ 27341255 (-) |
| G1359378 | NA | non-coding | upstream | 253110 | 27451209 ~ 27451997 (-) |
| G1359406 | NA | non-coding | upstream | 302056 | 27500155 ~ 27500884 (-) |
| G1359119 | NA | other | downstream | 84350 | 27111783 ~ 27113401 (-) |
| LOC110491745 | LOC106609103 | other | downstream | 454296 | 26729304 ~ 26744821 (-) |
| G1357833 | NA | other | downstream | 469923 | 26727295 ~ 26727828 (-) |
| LOC110491708 | LOC106561205 | other | downstream | 2309107 | 24884866 ~ 24889077 (-) |
| LOC110492858 | LOC106579369 | other | downstream | 3163341 | 23995179 ~ 24034410 (-) |
| G1359321 | NA | other | upstream | 159185 | 27357284 ~ 27359562 (-) |
| G1359412 | NA | other | upstream | 329064 | 27527163 ~ 27528137 (-) |
| G1359763 | NA | other | upstream | 965364 | 28163463 ~ 28164227 (-) |
| taok2b | LOC106579406 | other | upstream | 979616 | 28177715 ~ 28237354 (-) |
| G1361290 | NA | other | upstream | 2299014 | 29497113 ~ 29497555 (-) |
