G1358245


Basic Information

Item Value
gene id G1358245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 27251269 ~ 27252172 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1552466
CTTTTTATACAGGTATCCTTCTTTGTCGACGGGTGAGCTGCACGACTGAAAATGAGTGAGGATCTTCCCGGTAATCTTCATCTCAACACCATGCTTTTACCATAGGAGTAGCTGGAGTTGGGCTCTGCAGAATAACGTGTGAAGGCTCACCAGGTATTGGCTAGAGAGGATACAGTTGTTGtcaaattgatgtaaaaaataaaatgttgcattttagctaaccataacccttttcTTAACCTTAACCTACTTCTCATAATCTgttacgttaattatcctaacctgctacgaaaaatcCATTGTGACATAAActgtatcccttctagacaaaacCGTCCCACCAGCTCCCTGGGTGTTGTCAAACA

Function

NR:

description
PREDICTED: sesquipedalian-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1552466 True 365 lncRNA 0.41 2 27251269 27252172

Neighbor

gene id symbol gene type direction distance location
LOC110492891 NA coding upstream 152049 27098269 ~ 27099220 (+)
LOC110492862 kcnh6 coding upstream 205754 27018092 ~ 27045515 (+)
LOC110492861 LOC106579084 coding upstream 252914 26994629 ~ 26998355 (+)
ngfrb LOC106579090 coding upstream 674116 26495038 ~ 26577153 (+)
mpp3b LOC106579097 coding upstream 936460 26283071 ~ 26314809 (+)
LOC110491761 tceb2 coding downstream 80658 27332830 ~ 27359591 (+)
LOC110491760 tgfi1 coding downstream 108381 27360553 ~ 27382020 (+)
patl2 patl2 coding downstream 130107 27382279 ~ 27398868 (+)
cmn LOC106579069 coding downstream 178979 27431151 ~ 27500887 (+)
LOC110492863 paqr4 coding downstream 249159 27501331 ~ 27504634 (+)
G1358223 NA non-coding upstream 53023 27198031 ~ 27198246 (+)
G1358221 NA non-coding upstream 56598 27194464 ~ 27194671 (+)
G1358217 NA non-coding upstream 60551 27190482 ~ 27190718 (+)
G1358205 NA non-coding upstream 81586 27169461 ~ 27169683 (+)
G1358203 NA non-coding upstream 82879 27168046 ~ 27168390 (+)
G1358342 NA non-coding downstream 257446 27509618 ~ 27510435 (+)
G1358397 NA non-coding downstream 287388 27539560 ~ 27539829 (+)
G1358398 NA non-coding downstream 289527 27541699 ~ 27541936 (+)
G1358437 NA non-coding downstream 348343 27600515 ~ 27601054 (+)
znf281b LOC106578343 other upstream 1161886 26076461 ~ 26107407 (+)
dcakd dcakd other upstream 2467757 24764607 ~ 24783513 (+)
G1355273 NA other upstream 2567350 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 2570154 24670341 ~ 24681115 (+)
G1358292 NA other downstream 77139 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 308975 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 650878 27902972 ~ 27986259 (+)
G1358698 kif22 other downstream 794510 28046682 ~ 28047390 (+)
G1361207 NA other downstream 2550482 29802654 ~ 29804368 (+)

Expression


Co-expression Network