G1358292


Basic Information

Item Value
gene id G1358292
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 27329311 ~ 27332275 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1552517
CATGAGAAGAGGATGGCTGCATCAAAGCTCCCAAACAAAAGTTTGACTTTGAGTCAAGTTCTGGATATGTTGGATCTAGGTGACCGCCCAGACAAGGCGTGCAACATTGCAGGTATCCCTCAAAATGAGAAAGATGCTGTCCTCCGTGATTGTGATAGCGATGGGTCAGATATGGACTatgagggggagacaggccattTGCCAGCCAGGCTGTTAAATGCATATGCTGACCGTATGCAAACAGATCATGACAGGAACAACGTTATCAGTGATGATGACCTACCCCTCACCACCGTTGATAATGAAGAGCCAACGGCCTCTACTCGCCAGAGGGTCCAGTCAGAAGAGCTAAGGGCAAAGCTGCAAGTGGCCAACAATAAAGATTGAGTGTTCAAACGATCGAAGAGGCCTACCACCGCTGTGATTCCAAAACACATAGTATACAGTCCAAATGCTGCAGAATGTGTAAAACAAAGCTGCCCCAACCCAATGGATGTTTTCCTACTAATGTATCCATCCACCCTAAGAGAGATCACCATTGAAATGTCCAATCTCTACTCCACCAAGACCAAGGACAAGCAACTGAGTATGGATGAGCTCCTTACATTCTATGGGATCCTTGTACCATCTGGGTACAGCTCAGTTCCAAGATGACACATGTACTGGTCACTTGACAGTGATGTACATAATGAAAGTATTTCAGATGCAATGCAGATAAATCACTTTGATTAAATAATGGCCTCAGTTCGTGTGGTTGACAACACAAAGAACACTGACGACCAATTTTTTAAGGTTAGGCCCATCTTTCCGAGCTCAATCAGTCATACAAAGTCATGCCATTTCAGAAATGGCTGTCAGTGGATGAGCATGATCCTATACTATGGATGTAAGCAATTCATTAGAACTAAACCAATCCGTTTTGGTTACAAGCTATGGAGCCTTGCCTCACCCAGTGGTTACATGtatcacatatacatatatatgatGGATCCCACACACTCCTCCCTGAGACTGGGTTGGTTCAGGGATCCAGTGTTGTTCTCGGTCTTGCAGAGCAATCTCAGGCGCCTCAAGGTTGCAAGTTCCTTCATGATAACCTCTTCACTTTGCTTGCACTCCTCGATGAAATTACAAAAAGAGGATATGGGAGCTCTGGATCGATGAGGCCAAATTGTCTGTTTGATGTCCCATTTAAACCACAGAAGGACTTCATGAAGTTACCCCGGGGAACCTGAGGTTCTAACCCGAGGAGACAAGTTGCTGGTCCGTTGGAAAGACAATAACATTGTCACAGTTGTCACGAAATGGCTCAAAGTTTGTAACAAaggggagacaacgtggagacaaggaacaacaaaatatatttattaaataaagcaAACTAAATACAATTAACTGTTGTGTAAGTCAGTGTTTGCATGCATAAATGTGAtgatgcagggtgttgaaaggtgccaaagcaaacaaacagcCACATAAAcaccaaaacaaaatatataaaggtgtctgcatggagagagtctcctccatgaatggggaagtggtgtatctatcctgggacacacccgggcccaggtgtgtcccatgtcGCTGATGACCCTCCCAGCTCCACCCACCTGCATCCTAATAAGGAatacaagagcaaagagaaagaatacggcagacagagtgggaggatcGTCACACAGTGGCAACAAACATGGAGGAGAAATATAGTGAGACCTCTGTCAAGAGATGGAACAAGGAGCGACGTGCCTTTGACAAAGTCCCACAACCAAAATGCAATAACTGATACAATGAGCACATAGGTGGTGTTGACCTTCACGACCTATAGGTTTCAAGATACCATATCTCCATCAGGTCTAAGAAGTGGTGGTGGCCCATCTTTGCATGGTCTCTCAACAGTGCACTCATAAACAGCCATTTATTTTAAAGACACATTATGGGAGAGACCATTGACCTGCTCACCTTCTCACGGATAGGGGCACATTCTCTTATGCAAAAGTTTGGTCCAAAACCACTGAGTCACGGAAGGAGATCTCTACTGGCTGCTAGTGTTGAAGATTAGGCAAGATATGACAAAGCTTCTCACTGGCAAATCAACACGATGCACCGGTTCCAGAGATGTGACAAATGGTGACAAACGCACTACCTATGCATGTCAGAAATGCAAAGCGCCACTGCACATTGAGTGCTTCAAGATATACCACGGACAGTGGAAAAGAAAATAAGAGTGAATGAAAAAGCCAATAAAAGAAGAatggaaaagtcaaagggtgaggataagcagtacaacggactctaggaaaaaaagaaaagtaaaaaaaaaaaaaatcagaatgaCTGAAATGTTTTTGGAAAAAAAGGTCAATTGATTCAAGACGTACTGTATTGACAGTAGGTCTGAATGATCGTAGTTCAAAATAGTGATGCACAAACTAATCATGCACTTGGTTCTGAAGCCTACCTTtgatatattattttattttgttcagtgtaggccTCTACTTGAATGCATATTCTACAGGCTACCTCGATCCTAAATGTTACCTGTATGTTCAATGTGAATGAATCACACGACTGCTATACAGTTGTTAGTGAATGTTGCACTAAAATGTCACAATGACAATGTTATAATGAATATTGCACTAGAGTACAACTTCAAATGTTACAATAAAGTTACAATATTAATGTTTCAGTACATGTTGTACTAAAGTAACAATGTTACAATAAAG

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1552517 True 2735 TUCP 0.42 2 27329311 27332275

Neighbor

gene id symbol gene type direction distance location
LOC110492891 NA coding upstream 230091 27098269 ~ 27099220 (+)
LOC110492862 kcnh6 coding upstream 283796 27018092 ~ 27045515 (+)
LOC110492861 LOC106579084 coding upstream 330956 26994629 ~ 26998355 (+)
ngfrb LOC106579090 coding upstream 752158 26495038 ~ 26577153 (+)
mpp3b LOC106579097 coding upstream 1014502 26283071 ~ 26314809 (+)
LOC110491761 tceb2 coding downstream 555 27332830 ~ 27359591 (+)
LOC110491760 tgfi1 coding downstream 28278 27360553 ~ 27382020 (+)
patl2 patl2 coding downstream 50004 27382279 ~ 27398868 (+)
cmn LOC106579069 coding downstream 98876 27431151 ~ 27500887 (+)
LOC110492863 paqr4 coding downstream 169056 27501331 ~ 27504634 (+)
G1358245 NA non-coding upstream 77139 27251269 ~ 27252172 (+)
G1358223 NA non-coding upstream 131065 27198031 ~ 27198246 (+)
G1358221 NA non-coding upstream 134640 27194464 ~ 27194671 (+)
G1358217 NA non-coding upstream 138593 27190482 ~ 27190718 (+)
G1358205 NA non-coding upstream 159628 27169461 ~ 27169683 (+)
G1358342 NA non-coding downstream 177343 27509618 ~ 27510435 (+)
G1358397 NA non-coding downstream 207285 27539560 ~ 27539829 (+)
G1358398 NA non-coding downstream 209424 27541699 ~ 27541936 (+)
G1358437 NA non-coding downstream 268240 27600515 ~ 27601054 (+)
znf281b LOC106578343 other upstream 1239928 26076461 ~ 26107407 (+)
dcakd dcakd other upstream 2545799 24764607 ~ 24783513 (+)
G1355273 NA other upstream 2645392 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 2648196 24670341 ~ 24681115 (+)
LOC110491768 LOC106579066 other downstream 228872 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 570775 27902972 ~ 27986259 (+)
G1358698 kif22 other downstream 714407 28046682 ~ 28047390 (+)
G1361207 NA other downstream 2470379 29802654 ~ 29804368 (+)
G1361671 NA other downstream 2611166 29943441 ~ 29943756 (+)

Expression


Co-expression Network