G1359321


Basic Information

Item Value
gene id G1359321
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 27357284 ~ 27359562 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1553687
CACAGTTACAGTCTATGTTTTTTCATTTGGGGCGGAAACTGATGTCACATGACCTGATGTATGGCAGGCCACCCCAAAGACCAGTCCAATGCTGATAACATCTTTTGCCAAGTTTTGCTTTAAATGTCACAAAAAGATGTCCTCAACCAACCGGTTCTCCTGCTTAGTCCAGGAGTTCCAAGCATTTGGTCTCAGTGCAAACAAACAAGAGTGAAGGGGCTGAAAATGTAAGAATTTCCACATTACATCAAATAAACTATAACGATGCTATAATGAAGTAGAACAGCATTTACCTTACAGTGTAAATGAGTTTTCCTTCCAGGTCTAAGTGTGAAAAGAAATCTATTCAGAAAAgcacactggaactgtgtgttcAGATAAGAATATATGATGTGGAACAAACATGGTGCTCTTTGTGTAAAATAAGCCATCACGTCAGATCTATTCATGACAATTCTATCTGCAACCGTTCCACAACATCCACGACTATTTTGAATGTAGCCCAGAGAAGAGAACTGGGGAACACGAAGATAATTTATGATGAAAGACTATAAAATGGTGGAGATTTTAGCGTTAGTCTTTTTTCTTGTTCTTTACAATGGGATTCTCTCATGCATGTTTGCACGTTTTAACGTTTGACTCCTAACCCATGCACATTTTTTTCCAGTACATTGTTTGTTACACACAAATGCTACTTTGCCATTTTAAAGGAAAgtttcacccattttgaatgtttttgtgcatctctgagcgATGTTCTATCGATTACCAGGGTCTTTTCATGTTATCTTGTGTATCTGAGCTATTTCCGTTCAAGCAGGCAGGAATTTGGCCGGTAAGACATAGCATTGCAATAAAGCCGCTCTCAttacactggaagttaataggaatatGACTTTCAGATCGCGAAAACATCTATCATACGTCAGATTTCAATACTTCCCGATGTCATAACACAAGGGGTAGTCTTCTCTTAAATTAACCACTGATCATAATTTAGCAAAAATCCTACCTCGAGAAATGTGTAATTTCAGAGGGTCCAGCACATTTCTCATATTTGTCTGCCTCTTCAGTCCAGGGAGTATTGCATGGTGCCGTTGCGAATGTCAGACCTCTGTGAGGCACATCGATCTGCATGTTGAACATGGTGATattgtagactcctaaattgatagtgcagtttCTTTAGGCGAATTTACAGATAACTAACTAGCCAGCCCATAGAGACCATTCCATTGGGGGTTTTGTAgtcgacttgagctgcaacagatttccacaacgATTTCCACCTCTTGCTACCAACCTTATTATaacgacaacatttaaaatatTGTTCTCACATAGTGTTCTTTTAACACTGTAAATTATAAGAATTAGCGGTTTTGGGTAGATTTTTCCTTTAAGAACAGTAATAGTAAGAACAATAATTATCTAACACTTATACAGGGTGGTAAATTAACACCAACCACATGCTGGTAGTTTGGCATTGCCTGGAATAATGTCTATTCTTACCAGACACATTGGCGGGTGGTCATACAGAGCATTTGAGTGCATTTTTCTTTTCTAAATCCAAAGcccacatgtaaaaaaaaaacatttaagtgTGAATATGCGTGTCAACTCTGGAAAATAGAATCTCAACGCTACAGTGGTGAAAGCATGATGGGGTACAGTCTTTTCTGTGATTTACATTTTTTCAGGGGGAAATGTGGCTGGTGAAAAATGTGAGTGGCTGGTAAAATTCGGGCATCCACCAACCACTACGTCTGGTGGACCAAAAAGTTAATTTCacaccctgcacacacacacacagagtcacactcAAAACCAACACAGAGTTATTCATTCAAATGAGTACACCTGACAAGAAGGCTGGGGAGCAAGGAAGGGGGGGTTCTTATCATAAAGTAACTGCTGTTTGCAAAGCATTCACAGGGATCCAGGAGTGTTCGGTTAAGGTGAAGGTGGTTGGTAGTAACCTGGTTTGGTTACACATGCCCCATCCCATCTTAACCCAAAATGATGGTACATATCCTCTACCCTGCCACCTATATACCTCCTTGGCTGTTTTTGTAGACAGCCCTCTCCCATCCCCGatccctccatgcctccctccatCACTGCACAGTCTGTTCGTTGgcagtgctgccagagtcttgGGGTTTCATGACGTCAGGGAGCTCTGGAGGGCTGGAGAATGCCCCCACCTGCAGCTGCTCA

Function

NR:

description
elongin-B-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1553687 True 2220 TUCP 0.41 2 27357284 27359562

Neighbor

gene id symbol gene type direction distance location
LOC110491762 NA coding downstream 22713 27320852 ~ 27334571 (-)
pkmyt1 pkmyt1 coding downstream 49404 27297334 ~ 27307880 (-)
LOC110491756 LOC106579074 coding downstream 76725 27266606 ~ 27280559 (-)
LOC110491757 LOC106579075 coding downstream 98309 27254721 ~ 27258975 (-)
mylpfb LOC106579077 coding downstream 102685 27226610 ~ 27254599 (-)
pelo pelo coding upstream 145743 27505305 ~ 27525446 (-)
atp2a1l LOC106579065 coding upstream 286531 27646093 ~ 27661310 (-)
ppp1cab LOC107387951 coding upstream 309285 27668847 ~ 27687988 (-)
LOC118939521 NA coding upstream 331246 27690808 ~ 27692238 (-)
mto1 mto1 coding upstream 368241 27727803 ~ 27755447 (-)
G1359274 NA non-coding downstream 16029 27339050 ~ 27341255 (-)
G1359276 NA non-coding downstream 20846 27334668 ~ 27336438 (-)
G1359243 NA non-coding downstream 158886 27198196 ~ 27198398 (-)
G1359242 NA non-coding downstream 159185 27197751 ~ 27198099 (-)
G1359239 NA non-coding downstream 162353 27194712 ~ 27194931 (-)
G1359378 NA non-coding upstream 91647 27451209 ~ 27451997 (-)
G1359406 NA non-coding upstream 140593 27500155 ~ 27500884 (-)
prrt2 LOC106579403 non-coding upstream 643203 28002303 ~ 28012976 (-)
G1359717 pagr1 non-coding upstream 691983 28051545 ~ 28072528 (-)
G1359748 NA non-coding upstream 773835 28133397 ~ 28133627 (-)
G1359119 NA other downstream 243883 27111783 ~ 27113401 (-)
LOC110491745 LOC106609103 other downstream 613829 26729304 ~ 26744821 (-)
G1357833 NA other downstream 629456 26727295 ~ 26727828 (-)
LOC110491708 LOC106561205 other downstream 2468640 24884866 ~ 24889077 (-)
LOC110492858 LOC106579369 other downstream 3322874 23995179 ~ 24034410 (-)
G1359412 NA other upstream 167601 27527163 ~ 27528137 (-)
G1359763 NA other upstream 803901 28163463 ~ 28164227 (-)
taok2b LOC106579406 other upstream 818153 28177715 ~ 28237354 (-)
G1361290 NA other upstream 2137551 29497113 ~ 29497555 (-)
G1361619 NA other upstream 2564309 29923871 ~ 29925154 (-)

Expression


Co-expression Network