G1359412


Basic Information

Item Value
gene id G1359412
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 27527163 ~ 27528137 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1553783
CAAATGcccgctggcttcccttgccttcaatgctacgggcgccaacaatgtcatactcgtttggaccagacagcatcaggtAGATGgccaacacacagagagacagtggggCACTGTTTTGcttgctcggatgctttctcctgttacatacattcagcctcttgtgatttgaaggaaaattatgaaacacaataagacaaaatattttttgttatatacagtatatcacaaaagtgagtacacccctcacatttttgtaaatatttgagtatatcttttcatgtgacaacactgaagaaattacactttgctacaatgtaaagtagtgagtgtacagcttgtataacagtgtaaatttgctgtcccctcaaaataactcaacacacagccattaatgtctaaaccgctggcaacaaaagtgagtacacccctaagtgaaaatgtccaaattgggcccaaagtgtcaatattttgtgtggccaccatcattttccagcactgccttaaccctcttgggcatggagttcaccagagcttcacaggttgccactggagtcctcttccactcctccatgacaacatcacggagctggtggatgttagagaccttgcactcctccaccttccgtttgaggatgccccacagatgctcaatggggtttaggtctggagacatgcttggccagtccatcacctttaccctcagcttctttagcaaggcagtggtcgtcttggaggtgtgtttggggtcgttatcatgttggaatactgccctgcggcccagtctccgaagggaggggatcatgctctgcttcagtatgtcacagtacatgttggcattcatggttccctcaattaactgtagctccccagtgccggcagcactcatgcagccccagaccatgacactcccaccaccatgcttgactgtaggcaagacacacttgtctttgtactcctcacctggttgccgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1553783 True 975 TUCP 0.47 1 27527163 27528137

Neighbor

gene id symbol gene type direction distance location
pelo pelo coding downstream 1717 27505305 ~ 27525446 (-)
LOC110491762 NA coding downstream 192592 27320852 ~ 27334571 (-)
pkmyt1 pkmyt1 coding downstream 219283 27297334 ~ 27307880 (-)
LOC110491756 LOC106579074 coding downstream 246604 27266606 ~ 27280559 (-)
LOC110491757 LOC106579075 coding downstream 268188 27254721 ~ 27258975 (-)
atp2a1l LOC106579065 coding upstream 117956 27646093 ~ 27661310 (-)
ppp1cab LOC107387951 coding upstream 140710 27668847 ~ 27687988 (-)
LOC118939521 NA coding upstream 162671 27690808 ~ 27692238 (-)
mto1 mto1 coding upstream 199666 27727803 ~ 27755447 (-)
adprh LOC106579059 coding upstream 298046 27826183 ~ 27842455 (-)
G1359406 NA non-coding downstream 26279 27500155 ~ 27500884 (-)
G1359378 NA non-coding downstream 75166 27451209 ~ 27451997 (-)
G1359274 NA non-coding downstream 185908 27339050 ~ 27341255 (-)
G1359276 NA non-coding downstream 190725 27334668 ~ 27336438 (-)
G1359243 NA non-coding downstream 328765 27198196 ~ 27198398 (-)
prrt2 LOC106579403 non-coding upstream 474628 28002303 ~ 28012976 (-)
G1359717 pagr1 non-coding upstream 523408 28051545 ~ 28072528 (-)
G1359748 NA non-coding upstream 605260 28133397 ~ 28133627 (-)
G1359771 NA non-coding upstream 648820 28176957 ~ 28177207 (-)
G1359773 NA non-coding upstream 649135 28177272 ~ 28177556 (-)
G1359321 NA other downstream 167601 27357284 ~ 27359562 (-)
G1359119 NA other downstream 413762 27111783 ~ 27113401 (-)
LOC110491745 LOC106609103 other downstream 783708 26729304 ~ 26744821 (-)
G1357833 NA other downstream 799335 26727295 ~ 26727828 (-)
LOC110491708 LOC106561205 other downstream 2638519 24884866 ~ 24889077 (-)
G1359763 NA other upstream 635326 28163463 ~ 28164227 (-)
taok2b LOC106579406 other upstream 649578 28177715 ~ 28237354 (-)
G1361290 NA other upstream 1968976 29497113 ~ 29497555 (-)
G1361619 NA other upstream 2395734 29923871 ~ 29925154 (-)
G1363836 NA other upstream 4111300 31639437 ~ 31650697 (-)

Expression

G1359412 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

G1359412 Expression in each Bioproject

Bar chart with 20 bars.
G1359412 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G3934 NA non-coding CI01000000 null 6188521 ~ 6223257 (-)
mexican tetra (Astyanax mexicanus) G3337 NA non-coding NC_035897.1 CM008300.1 13034489 ~ 13035079 (-)