XLOC_032724


Basic Information

Item Value
gene id XLOC_032724
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 16827918 ~ 16831484 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065112
ATTTACTGCAAGACCTGGAGCTCAGGAagcaggtagaactgcttgaacagactgaaaATTGGAGTTTGCTTTCAAAGAAATCCATTGAGATAAAATAAcgacctgatatctttctctttgacaggttggcatggagcatgtggaggAACAGGGAAACGCACCTTAGTAATGACAAGTGCATCGTAATAAATTAGATACAGACTTACACTTTTTtaggttgaatcaaattaactttataaaacatttaaaatcatataCTTTCATTTGTACATACTAGATGATTGTCTGGAATCTCTTTAAGCCAGATAAATGTCTTGTTTGcggcaggtgtttctttttcctgtaatggacacacaacagacagaagaaggagactcacaagagcatctgTGGAAATTTGTCTGAAAACCGCTGGTTAACAGTTTATGCATTTctggagttcagcaagcatgtagagctctgttagttgtGTCTTTATCTTTTCCAGGctggagtgcagcatgtggagacaaataggaatcacacacctcagcaatggacactgatggtcaggaATATCCTTTAAAGGCAGATGAatgggtgcatggatggatgtccttccaagtggaagggggtggtggtgggcatagattgttagatatATGTATTgtctgtggctgttatttacaacttcaacAGGCAGAAGAGTCAGACTCACAAGCAAAATGGTGAATATTTATCTGAGGAACACTGGAGAACGTTTGGTTTATTGATGCAGATCATCCAGCAAGTAGAGctttgttagtcttgtttttgtcttttgcagattagaCTGGGGCCTGTGGAGAAATGGGACTCGCACCTCAGCATGACTGGAAACTGATGgtctgggctgcgtttcccaaacaacgaagtAACTCACGGCTAAACTATAAAAGTCTGATGCATCGTTtgagaaaagaatgatgtagtgacgagtgttttccaaaacctgtagtttctctgtcgcagatttaTCGCTTAAACCAGATTAGTTATAATTATGATAAAATGCccgtaatgatgctctaaactacttctttagagaaaagaaacttaatttatttgtgcaaattatacacgcacacgcatttacAATAGCAttcaatattagatttggtaaaaataTGCACTCGCTTTCTAtaataactgaaatatatgtaaatgacacaAACAGGGCTAATGTttgtttactaatattattgagaagttaaacattacacattctattctaaaacatatcacttacaaaagctaacacgtattctaatatcatataaatcataaaaataaataaataataaaggctatttattataaaatgaaatgtaatattaattatttattagaaattaaaaaatgctactttaataataatattaatgatgatgatggtgatgatgattcttattattattaagtaggatatttatttatttattattatttttttaagtctacttttacaatttaacacatgtaaaccactttAGAAAGTTCTAACTGGCAGGcctatgtcatatacagtacagatacttaataaatgacccaatataaatgaaaagaattaccgtatgctttttgttttcacaagctttggagacgtaacataaattccgcttttaaataataggtcacctatagctttcaccaTGAGGCTGTgtacaaaatgacatcaatgttttcaaagtgcactgcgaagggagcacagttGTAAACTGTAAGATCTGTAAGATCacgaaaactgaactgtaaaaatagtttgaaagcaaattacacctaagagagatgactttaatattttttttattttttaataattgcaactttgaatgttaaaatgttctaaatgaatagggcatagggggaataactgagaatagaacacagtcaggaacaatgtttctaactacagctccagataGTTGGAAAGATGTCTTCTTTGTGGCAGCAAAAGTATCTTAAATCAATcaaatgtaaagacacaactggaatgatttaattatgttaattatttagagaacaaagtattattataatacaaatattaaataataataatagttttatttataatataattcaaattttaattaaaaatattcagtATAGCTATTTATATatgggtaaataaatgtttttttttgggtggggtgCAGTTGAGGGGGGCTCGTGGCCCAGTAGAGCTTTACCCCTGAGACTAACAAGGGGAACAGTGGAGATAAACTGGAAGACCTGGAGCTCGGCAAAgaggtagaactgcttgaacagactgaaaAATGGAGTTAGTTTCCAAAGAAATTTATTGAGATTAATTAtagacctgatatctttctctttggcagattTGTACGGAGCATGTGGAAAAACAGGAAAACACACCTCAGTAATCACAAGTGCATCATAATAAATTAGGTacagccttacatttttaagttgaatcaaattaacttcatcaaacattttaatttacatatttatattttcacaGAGTGATAGTCGGGTATTTTCtttggatggacggacggacgaacggatAGATAGTATTGAACAAGCAGGTAGAgctctgttgatgttttctttgtcttttacagagtgGAGTAGAGAATTTAGGGAATCACATCTCAGCAATGATAAGAAACTGCTGGTCAGGTATCACCTATCACCGAAAGATGTTTAAGAGGAAGGGGGGCGGTGGTGGGCTTGAGCTGGGCTCAGACTATAGGAGTTTTAAAAACCTAACCGATAATGAAATCCGGTTGCTGTGAACACATGAGGAGAATCTTTGGCTAATTTTTTAGCCCACCTCAAATCTTAAATGTGTGCAAagtacaaaatatgaaaactgcgCCACAGCACACAAGATGTTAAGGTTATCCTGACCGATGGAGCACATCACTCTCTTTGTCAAAaattacgctttttttttttactaatattagATTATTAAATTATGCGGTGGTTCGGTTCTGGGTTTTTCGGGGTCGACAGCTATTCTCGACTCTTAATTTTGGAGTCGGTGGAATCGGCTCAAGAATCAACACCTTTTACATTCACTTAAAATAGCGCAAGGATTAAACATGCTGTATCATATCGTTCTTTATACAAGCAGTTCTCCTGTGGTcagacaaaatcagcattttaaatcctctgcagtcaaaataaaataataatcagcctatactttttttaatttagaaaattaaACTGCAATCTTTGAGACAGAAAGTTAAAACCCcaatttattatcaaaatatttaatgaaaagatGTGTAGCAGCAGttcaataacaaattaaaaaacaccCCAATTGAGCCCAAACAACGcttaaataaaaatcatgaaataCCCTTAATATCttcttaatataaatgtttgataCATGAATACAGAGTATGAGTGAACAAAATAATCTGGAGTAGTGAACAGTCTGAGGTTGTTTAGTACTATATTTGTTTTAAAGGCAACAGATGCTCtaactcaggggtgtccaaactcggtcctggagggccggtgtcctgcagattttagctccaacttgcctcaaca

Function

GO:

id name namespace
GO:0022402 cell cycle process biological_process
GO:0045446 endothelial cell differentiation biological_process
GO:0007049 cell cycle biological_process
GO:0061028 establishment of endothelial barrier biological_process
GO:0051301 cell division biological_process
GO:1903047 mitotic cell cycle process biological_process
GO:0000278 mitotic cell cycle biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065112 True 3567 lncRNA 0.35 1 16827918 16831484

Neighbor

gene id symbol gene type direction distance location
XLOC_032723 BX664705.2 coding downstream 22080 16805744 ~ 16805838 (-)
XLOC_032722 pimr40 coding downstream 23917 16801893 ~ 16804001 (-)
XLOC_032721 NA coding downstream 52114 16775442 ~ 16775804 (-)
XLOC_032720 CR762392.2 coding downstream 89954 16737867 ~ 16737964 (-)
XLOC_032719 pimr44 coding downstream 92516 16734086 ~ 16735402 (-)
XLOC_032725 NA coding upstream 6608 16838092 ~ 16838470 (-)
XLOC_032726 NA coding upstream 8369 16839853 ~ 16840558 (-)
XLOC_032727 BX664705.1 coding upstream 23258 16854742 ~ 16856587 (-)
XLOC_032728 pimr41 coding upstream 36034 16867518 ~ 16868834 (-)
XLOC_032729 BX664705.3 coding upstream 39822 16871306 ~ 16871403 (-)
XLOC_032718 NA non-coding downstream 96810 16728756 ~ 16731108 (-)
XLOC_032717 CR762392.1 non-coding downstream 104455 16722014 ~ 16723463 (-)
XLOC_032731 BX649628.3 non-coding upstream 65494 16896978 ~ 16897074 (-)

Expression


Co-expression Network