Item | Value |
---|---|
gene id | G1358437 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048580.1 |
NCBI id | CM023234.2 |
chromosome length | 78541548 |
location | 27600515 ~ 27601054 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1552683 | True | 503 | lncRNA | 0.44 | 2 | 27600515 | 27601054 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110491768 | LOC106579066 | coding | upstream | 5165 | 27561141 ~ 27595350 (+) |
LOC110492863 | paqr4 | coding | upstream | 95881 | 27501331 ~ 27504634 (+) |
cmn | LOC106579069 | coding | upstream | 99628 | 27431151 ~ 27500887 (+) |
patl2 | patl2 | coding | upstream | 201647 | 27382279 ~ 27398868 (+) |
LOC110491760 | tgfi1 | coding | upstream | 218495 | 27360553 ~ 27382020 (+) |
LOC110491774 | LOC106579062 | coding | downstream | 102329 | 27703383 ~ 27727796 (+) |
LOC110491775 | LOC106579060 | coding | downstream | 175228 | 27776282 ~ 27823581 (+) |
LOC110491776 | LOC106579398 | coding | downstream | 301918 | 27902972 ~ 27986259 (+) |
pagr1 | pagr1 | coding | downstream | 448012 | 28049066 ~ 28081371 (+) |
cabp5a | LOC106579440 | coding | downstream | 659229 | 28260283 ~ 28266022 (+) |
G1358398 | NA | non-coding | upstream | 58579 | 27541699 ~ 27541936 (+) |
G1358397 | NA | non-coding | upstream | 60686 | 27539560 ~ 27539829 (+) |
G1358342 | NA | non-coding | upstream | 90080 | 27509618 ~ 27510435 (+) |
LOC110491761 | tceb2 | non-coding | upstream | 259313 | 27332830 ~ 27359591 (+) |
G1358245 | NA | non-coding | upstream | 348343 | 27251269 ~ 27252172 (+) |
G1358411 | NA | non-coding | downstream | 59675 | 27660729 ~ 27759730 (+) |
G1358412 | LOC107387951 | non-coding | downstream | 67795 | 27668849 ~ 27687905 (+) |
G1358619 | NA | non-coding | downstream | 341322 | 27942376 ~ 27945256 (+) |
G1358292 | NA | other | upstream | 268240 | 27329311 ~ 27332275 (+) |
mpp3b | LOC106579097 | other | upstream | 1285714 | 26283071 ~ 26314809 (+) |
znf281b | LOC106578343 | other | upstream | 1511132 | 26076461 ~ 26107407 (+) |
dcakd | dcakd | other | upstream | 2817003 | 24764607 ~ 24783513 (+) |
G1358698 | kif22 | other | downstream | 445628 | 28046682 ~ 28047390 (+) |
G1361207 | NA | other | downstream | 2201600 | 29802654 ~ 29804368 (+) |
G1361671 | NA | other | downstream | 2342387 | 29943441 ~ 29943756 (+) |
LOC110492869 | LOC106599969 | other | downstream | 3102593 | 30700999 ~ 30704172 (+) |