G1358437



Basic Information


Item Value
gene id G1358437
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 27600515 ~ 27601054 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1552683
gtcttgtagatgacatggagccagtgggtttggcgacgagtatgaagcgagggccagccaacgagagcgtacaggtcgcaatggtgggtagtatatggggctttggtgacaaaacggattgcactgtgatagactgcatccaatttgttgagtagggtattggaggctattttgtaaattacatcgccaaagtcgaggattggtaggatggtcttGTATGGATGGATGCttttgtaatatactgtatctgtCCTACTATGGCGTCtaagacagcataggcagcaacattgaggctatctccattttCAAGTAGTCAATTTCCTTCTTTTGTGTTAAAAAAACGAAAAAGCTTATAATGGTAATTTAACGCCACCTGCAGTGCTGGTGTCCTGAATGGCAGTGATACAGCTTAAACCCATTTACAAATCAGGCAACCCAATTTGAAGAAGAAGCCAATGCGCAGATCATTGGCTGATCActcccaactcataggaatccccacc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1552683 True 503 lncRNA 0.44 2 27600515 27601054

Neighbor


gene id symbol gene type direction distance location
LOC110491768 LOC106579066 coding upstream 5165 27561141 ~ 27595350 (+)
LOC110492863 paqr4 coding upstream 95881 27501331 ~ 27504634 (+)
cmn LOC106579069 coding upstream 99628 27431151 ~ 27500887 (+)
patl2 patl2 coding upstream 201647 27382279 ~ 27398868 (+)
LOC110491760 tgfi1 coding upstream 218495 27360553 ~ 27382020 (+)
LOC110491774 LOC106579062 coding downstream 102329 27703383 ~ 27727796 (+)
LOC110491775 LOC106579060 coding downstream 175228 27776282 ~ 27823581 (+)
LOC110491776 LOC106579398 coding downstream 301918 27902972 ~ 27986259 (+)
pagr1 pagr1 coding downstream 448012 28049066 ~ 28081371 (+)
cabp5a LOC106579440 coding downstream 659229 28260283 ~ 28266022 (+)
G1358398 NA non-coding upstream 58579 27541699 ~ 27541936 (+)
G1358397 NA non-coding upstream 60686 27539560 ~ 27539829 (+)
G1358342 NA non-coding upstream 90080 27509618 ~ 27510435 (+)
LOC110491761 tceb2 non-coding upstream 259313 27332830 ~ 27359591 (+)
G1358245 NA non-coding upstream 348343 27251269 ~ 27252172 (+)
G1358411 NA non-coding downstream 59675 27660729 ~ 27759730 (+)
G1358412 LOC107387951 non-coding downstream 67795 27668849 ~ 27687905 (+)
G1358619 NA non-coding downstream 341322 27942376 ~ 27945256 (+)
G1358292 NA other upstream 268240 27329311 ~ 27332275 (+)
mpp3b LOC106579097 other upstream 1285714 26283071 ~ 26314809 (+)
znf281b LOC106578343 other upstream 1511132 26076461 ~ 26107407 (+)
dcakd dcakd other upstream 2817003 24764607 ~ 24783513 (+)
G1358698 kif22 other downstream 445628 28046682 ~ 28047390 (+)
G1361207 NA other downstream 2201600 29802654 ~ 29804368 (+)
G1361671 NA other downstream 2342387 29943441 ~ 29943756 (+)
LOC110492869 LOC106599969 other downstream 3102593 30700999 ~ 30704172 (+)

Expression



Co-expression Network