G1358619


Basic Information

Item Value
gene id G1358619
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 27942376 ~ 27945256 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1552881
gtttgtaacaaggcactaaagtaatactacacattgttttgcaaaacaataaacattttgtcctgaatagaaaaattgttatgtttggggcaaatccaatgcaacacattgagtgccactctccatattttcaagcatagtggtggctgcatcatgttatgggtatgcttgtaatcgtttttcaggataaaaaagaaacggaatggattTGAGCACGGGCAAAAtcctagaggaaaatctggttccatctgctttccaccagacactggaagattagttcacctttcagcgggacaataacctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1552881 True 304 lncRNA 0.39 2 27942376 27945256

Neighbor

gene id symbol gene type direction distance location
LOC110491775 LOC106579060 coding upstream 118795 27776282 ~ 27823581 (+)
LOC110491774 LOC106579062 coding upstream 214580 27703383 ~ 27727796 (+)
sult1st6 LOC106579067 coding upstream 296299 27595428 ~ 27646077 (+)
LOC110491768 LOC106579066 coding upstream 347026 27561141 ~ 27595350 (+)
LOC110492863 paqr4 coding upstream 437742 27501331 ~ 27504634 (+)
pagr1 pagr1 coding downstream 103810 28049066 ~ 28081371 (+)
cabp5a LOC106579440 coding downstream 315027 28260283 ~ 28266022 (+)
nif3l1 nif3l1 coding downstream 333401 28278657 ~ 28287808 (+)
LOC110492866 LOC106521360 coding downstream 634113 28579369 ~ 28607901 (+)
si:ch211-214e3.5 LOC106579413 coding downstream 888108 28833364 ~ 28857801 (+)
G1358411 NA non-coding upstream 182646 27660729 ~ 27759730 (+)
G1358412 LOC107387951 non-coding upstream 254471 27668849 ~ 27687905 (+)
G1358437 NA non-coding upstream 341322 27600515 ~ 27601054 (+)
G1358398 NA non-coding upstream 400440 27541699 ~ 27541936 (+)
LOC110491776 LOC106579398 non-coding downstream 40200 27902972 ~ 27986259 (+)
G1358656 NA non-coding downstream 57053 28002309 ~ 28004524 (+)
G1358671 NA non-coding downstream 75128 28020384 ~ 28034898 (+)
G1358725 NA non-coding downstream 157909 28103165 ~ 28127485 (+)
G1358757 NA non-coding downstream 232039 28177295 ~ 28181077 (+)
G1358292 NA other upstream 610101 27329311 ~ 27332275 (+)
mpp3b LOC106579097 other upstream 1627575 26283071 ~ 26314809 (+)
znf281b LOC106578343 other upstream 1852993 26076461 ~ 26107407 (+)
dcakd dcakd other upstream 3158864 24764607 ~ 24783513 (+)
G1358698 kif22 other downstream 101426 28046682 ~ 28047390 (+)
G1361207 NA other downstream 1857398 29802654 ~ 29804368 (+)
G1361671 NA other downstream 1998185 29943441 ~ 29943756 (+)
LOC110492869 LOC106599969 other downstream 2758391 30700999 ~ 30704172 (+)
G1362902 fgfr2 other downstream 3009353 30954609 ~ 30955975 (+)

Expression


Co-expression Network