Gene
RNA
| Item | Value |
|---|---|
| gene id | G1358725 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 28103165 ~ 28127485 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1553007 | True | 340 | lncRNA | 0.49 | 2 | 28103165 | 28127485 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pagr1 | pagr1 | coding | upstream | 21794 | 28049066 ~ 28081371 (+) |
| LOC110491776 | LOC106579398 | coding | upstream | 116906 | 27902972 ~ 27986259 (+) |
| LOC110491775 | LOC106579060 | coding | upstream | 279584 | 27776282 ~ 27823581 (+) |
| LOC110491774 | LOC106579062 | coding | upstream | 375369 | 27703383 ~ 27727796 (+) |
| sult1st6 | LOC106579067 | coding | upstream | 457088 | 27595428 ~ 27646077 (+) |
| cabp5a | LOC106579440 | coding | downstream | 132798 | 28260283 ~ 28266022 (+) |
| nif3l1 | nif3l1 | coding | downstream | 151172 | 28278657 ~ 28287808 (+) |
| LOC110492866 | LOC106521360 | coding | downstream | 451884 | 28579369 ~ 28607901 (+) |
| si:ch211-214e3.5 | LOC106579413 | coding | downstream | 705879 | 28833364 ~ 28857801 (+) |
| nrg3b | LOC106579414 | coding | downstream | 797332 | 28924817 ~ 29353460 (+) |
| G1358671 | NA | non-coding | upstream | 68267 | 28020384 ~ 28034898 (+) |
| G1358656 | NA | non-coding | upstream | 98641 | 28002309 ~ 28004524 (+) |
| G1358619 | NA | non-coding | upstream | 157909 | 27942376 ~ 27945256 (+) |
| G1358757 | NA | non-coding | downstream | 49810 | 28177295 ~ 28181077 (+) |
| G1358839 | NA | non-coding | downstream | 170784 | 28298269 ~ 28298893 (+) |
| G1358944 | NA | non-coding | downstream | 346393 | 28473878 ~ 28474231 (+) |
| G1358943 | NA | non-coding | downstream | 347409 | 28474894 ~ 28478300 (+) |
| G1358945 | NA | non-coding | downstream | 407833 | 28535318 ~ 28540660 (+) |
| G1358698 | kif22 | other | upstream | 55775 | 28046682 ~ 28047390 (+) |
| LOC110491768 | LOC106579066 | other | upstream | 526073 | 27561141 ~ 27595350 (+) |
| G1358292 | NA | other | upstream | 770890 | 27329311 ~ 27332275 (+) |
| mpp3b | LOC106579097 | other | upstream | 1788364 | 26283071 ~ 26314809 (+) |
| G1361207 | NA | other | downstream | 1675169 | 29802654 ~ 29804368 (+) |
| G1361671 | NA | other | downstream | 1815956 | 29943441 ~ 29943756 (+) |
| LOC110492869 | LOC106599969 | other | downstream | 2576162 | 30700999 ~ 30704172 (+) |
| G1362902 | fgfr2 | other | downstream | 2827124 | 30954609 ~ 30955975 (+) |
| G1363401 | NA | other | downstream | 3107008 | 31234493 ~ 31235386 (+) |
