XLOC_032726



Basic Information


Item Value
gene id XLOC_032726
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 16839853 ~ 16840558 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00065114
TTAAAGAGCAGGCAaaagagggagactcacaagagcatcggtgGAGATTTCTCTAAAAAATGCTGAAGAACAGCAGTTGGGGTTTTGTTGGGGCTGTCTTTGTTTATTTGCagattggagtggagcagaagaagGAGAACAGTGGAGATATACTTGAAGACCTGGAGCTCATGAAGCAGGTAGTGCTGCTTGAACAGACTAAACAATGGAGTTAGTTTCAAAAGAAATGTATTAAGATTAGTtaaagacctgatatctttctctttgacaggttggcatggagcatgtgaAGGAACAGGGAAACACACTGTAATGACAAGTGTATCATAATAAATTAGagtaAGTGTCACAGAAGGGACGACATTCAGTTCAGTAATATAACAGGACGTCAGGCTTGGAGACTGGAGACCAATAGGCAACTGGATACCACAGACAGCAAACAGGATGAAGACTAGACGAGGAACCAGGAGACACCTCACTAGGAGAGACACTGGAACTCACAGGAGATGTGCTTGTGGTGCTTCAGTGAGTGGAAAACCTGGTCTTAATGGGGC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00065114 True 554 lncRNA 0.44 3 16839853 16840558

Neighbor


gene id symbol gene type direction distance location
XLOC_032725 NA coding downstream 1383 16838092 ~ 16838470 (-)
XLOC_032724 NA coding downstream 8369 16827918 ~ 16831484 (-)
XLOC_032723 BX664705.2 coding downstream 34015 16805744 ~ 16805838 (-)
XLOC_032722 pimr40 coding downstream 35852 16801893 ~ 16804001 (-)
XLOC_032721 NA coding downstream 64049 16775442 ~ 16775804 (-)
XLOC_032727 BX664705.1 coding upstream 14184 16854742 ~ 16856587 (-)
XLOC_032728 pimr41 coding upstream 26960 16867518 ~ 16868834 (-)
XLOC_032729 BX664705.3 coding upstream 30748 16871306 ~ 16871403 (-)
XLOC_032730 pimr42 coding upstream 52613 16893171 ~ 16894312 (-)
XLOC_032731 BX649628.3 coding upstream 56420 16896978 ~ 16897074 (-)
XLOC_032720 CR762392.2 non-coding downstream 101889 16737867 ~ 16737964 (-)
XLOC_032732 NA non-coding upstream 75835 16916393 ~ 16917663 (-)
XLOC_032733 NA non-coding upstream 77830 16918388 ~ 16919504 (-)

Expression



Co-expression Network