XLOC_032727 (BX664705.1)


Basic Information

Item Value
gene id XLOC_032727
gene name BX664705.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 16854742 ~ 16856587 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063716
ATACAACTATAGTGACTGTGATGATgaaaatttatttggaaaaaagagACTGGAAAAGAAAGGCAGAATGGAGGATCTTTCAGAAATTGATGCAGCACCGCAAGTACCATCACcaccaatgactatgttaCTTTACGTTCCAGTACCCCTAGGAACATTTACAGTCCTTGTTCCAGTGCAGttggagatcaagacagaacttattgcaactcgtcatgtctttcaTTACTGACTGAACTTATAAAATCACAAGAGGTCATAAAGCAGCAACTGGACCTGATTCtcaaaaatcagcaaaaacaaAGCAGTACTCTGCAGCGGGATGAAACTCCAGATGCaagcacatttgaccttcctttgtccaatttatttgatttagaaaagcttgaacatcaactaaaggagcagcccgaacaaaggaAGAAAGTGtttattttacttattggtAGGTTTTCCACTAAAGAAGCAGTGTGGTGTGTCCTAGGAAAGCTTTTGGTCAACTCCTTGGCTAAACAAATGAACTGGAGTGGGGCAAACCAAAAAGTGGCTTTTCGTGCACTCACCCTAAGGACTGTCGTAGTCAatgcagtgaggacaaatgtccataccaatAGCGCCACTGATGAAGAGGTGGAGAAATACATCACAAGGTGGCTACAACTTGCTCCTGATAGGGttgatggaaggaaggaaagagagcagctaatgtgtcaaatgtctaaattactttatttttttaaattattttattttataacaacattttaagtgtattaagatgttccctgatacttgggcaatttctgttttaAGATGTCTTGTGCAATTTCATAGATTTTTacatgggtattttaagttgtttcctttttttaattttgtgcagtttctaagctttttttttttacagtctatttggaaacttttgtgcatgtgcaatttcagaattttaaaaaaatcttcctgtttacttaaatttgtttataatgtgtcattattctgcagcttcattgttattgctttattgaaatttttaattCTTGAGCAGTACAACatgtattcaattttattattatttgtttaatacttgtttaatcaataaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097141

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063716 True 1100 lncRNA 0.35 6 16854742 16856587

Neighbor

gene id symbol gene type direction distance location
XLOC_032726 NA coding downstream 14184 16839853 ~ 16840558 (-)
XLOC_032725 NA coding downstream 16272 16838092 ~ 16838470 (-)
XLOC_032724 NA coding downstream 23258 16827918 ~ 16831484 (-)
XLOC_032723 BX664705.2 coding downstream 48904 16805744 ~ 16805838 (-)
XLOC_032722 pimr40 coding downstream 50741 16801893 ~ 16804001 (-)
XLOC_032728 pimr41 coding upstream 10931 16867518 ~ 16868834 (-)
XLOC_032729 BX664705.3 coding upstream 14719 16871306 ~ 16871403 (-)
XLOC_032730 pimr42 coding upstream 36584 16893171 ~ 16894312 (-)
XLOC_032731 BX649628.3 coding upstream 40391 16896978 ~ 16897074 (-)
XLOC_032732 NA coding upstream 59806 16916393 ~ 16917663 (-)
XLOC_032721 NA non-coding downstream 78938 16775442 ~ 16775804 (-)
XLOC_032733 NA non-coding upstream 61801 16918388 ~ 16919504 (-)
XLOC_032734 NA non-coding upstream 69251 16925838 ~ 16926234 (-)

Expression


Co-expression Network