XLOC_032728 (pimr41)



Basic Information


Item Value
gene id XLOC_032728
gene name pimr41
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 16867518 ~ 16868834 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00063717
aggttggaggagattgtccatgtcccacatgggtgaagaaagaggagaagatacacgggactgcaccactgagcttcctggttttttggctcctctgccttcacatttggctgattctgcatccacagaccagaggaacagcaagaggaaaaggcagagcagcagccagcaaacactgtccacctcgtccagcagaccagccaaacgctctcgcagagacttgtaccagaagggcccgttgctgggacgaggtggattcggctctgtgtttgctgggatgcgcaggtctgatggactgccagtggccatcaagtaCGTGTCGAAGAACCGGACCCCCGAGCGactgaaagttgatggtcagggtcggctgccgctggaggtggcattgatgacccgtgtcacgtcagctcctgcctgccccagtgtcctgcagctgctggactggtttgaccgtcccaggcgctacatcctgatcctggagcgaccggatccttgccaagatctccagagcttctgtgaggagaacggctgtctggatgagcgtcttgcaaagaaagtgctggtgcagctgattgCGGCCCTTAAACACTGCGAGAGCCGTGgcgtcctgcaccgggacgtcaaaccagaaaacctcctgatctccacagagtcccaggacatcaagctgctggacttcggctgtggagatctgctgaagcgatcggcctacaaatactttgcaggcactcctgcatacgctcctcctga

Function


symbol description
pimr41 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116830

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00063717 True 750 mRNA 0.57 6 16867518 16868834

Neighbor


gene id symbol gene type direction distance location
XLOC_032727 BX664705.1 coding downstream 10931 16854742 ~ 16856587 (-)
XLOC_032726 NA coding downstream 26960 16839853 ~ 16840558 (-)
XLOC_032725 NA coding downstream 29048 16838092 ~ 16838470 (-)
XLOC_032724 NA coding downstream 36034 16827918 ~ 16831484 (-)
XLOC_032723 BX664705.2 coding downstream 61680 16805744 ~ 16805838 (-)
XLOC_032729 BX664705.3 coding upstream 2472 16871306 ~ 16871403 (-)
XLOC_032730 pimr42 coding upstream 24337 16893171 ~ 16894312 (-)
XLOC_032731 BX649628.3 coding upstream 28144 16896978 ~ 16897074 (-)
XLOC_032732 NA coding upstream 47559 16916393 ~ 16917663 (-)
XLOC_032733 NA coding upstream 49554 16918388 ~ 16919504 (-)
XLOC_032734 NA non-coding upstream 57004 16925838 ~ 16926234 (-)

Expression



Co-expression Network