G1360136


Basic Information

Item Value
gene id G1360136
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 28772625 ~ 28772825 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1554567
TCTTCTGTGAGACCACTGATGGGTTCTGACTataaaacttgaaacattgttaatTATCAGGTATTCTATGGAATTATTGAGTGACATAGACTGGTTTCTAAACCtaaagttaatggttatctgtagcaggaatgtatatggtggaggcaattaagcttggaatgtatTCAGTAAAGGAAGGACAATCACATAGTTGCAGgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1554567 True 201 lncRNA 0.36 1 28772625 28772825

Neighbor

gene id symbol gene type direction distance location
LOC110492866 LOC106521360 coding upstream 164724 28579369 ~ 28607901 (+)
nif3l1 nif3l1 coding upstream 484817 28278657 ~ 28287808 (+)
cabp5a LOC106579440 coding upstream 506603 28260283 ~ 28266022 (+)
pagr1 pagr1 coding upstream 691254 28049066 ~ 28081371 (+)
LOC110491776 LOC106579398 coding upstream 786366 27902972 ~ 27986259 (+)
si:ch211-214e3.5 LOC106579413 coding downstream 60539 28833364 ~ 28857801 (+)
nrg3b LOC106579414 coding downstream 151992 28924817 ~ 29353460 (+)
LOC110491795 LOC106579416 coding downstream 651516 29424341 ~ 29480114 (+)
irf3 irf-3 coding downstream 708819 29481644 ~ 29492902 (+)
LOC110491796 NA coding downstream 730584 29503409 ~ 29511609 (+)
G1359062 NA non-coding upstream 50049 28720708 ~ 28722576 (+)
G1358991 NA non-coding upstream 165793 28605939 ~ 28606832 (+)
G1358986 NA non-coding upstream 184251 28588055 ~ 28588374 (+)
G1358985 NA non-coding upstream 185788 28583855 ~ 28586837 (+)
G1358983 NA non-coding upstream 190966 28581301 ~ 28581659 (+)
G1360170 NA non-coding downstream 30427 28803252 ~ 28803455 (+)
G1360178 NA non-coding downstream 37329 28810154 ~ 28810361 (+)
G1360190 NA non-coding downstream 45225 28818050 ~ 28818255 (+)
G1360224 NA non-coding downstream 73021 28845846 ~ 28846052 (+)
G1358698 kif22 other upstream 725235 28046682 ~ 28047390 (+)
LOC110491768 LOC106579066 other upstream 1195533 27561141 ~ 27595350 (+)
G1358292 NA other upstream 1440350 27329311 ~ 27332275 (+)
mpp3b LOC106579097 other upstream 2457824 26283071 ~ 26314809 (+)
G1361207 NA other downstream 1029829 29802654 ~ 29804368 (+)
G1361671 NA other downstream 1170616 29943441 ~ 29943756 (+)
LOC110492869 LOC106599969 other downstream 1930822 30700999 ~ 30704172 (+)
G1362902 fgfr2 other downstream 2181784 30954609 ~ 30955975 (+)
G1363401 NA other downstream 2461668 31234493 ~ 31235386 (+)

Expression


Co-expression Network