XLOC_032730 (pimr42)



Basic Information


Item Value
gene id XLOC_032730
gene name pimr42
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 16893171 ~ 16894312 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00063719
AGAAGATACACGGGACGGCACCACTGAGCTTCCTGGTTTTTTGGCTCCTCTGCCTTCACATTTGGCTgattctgcatccacagaccagaggaacagcaagaggaaaaggcagagcagcagccagcaaacactgtccacctcgtccagcagaccagcaaaacgctctcgcagagacttgtacctgaagggcccgttgctgggacgaggtggattcggctctgtgtttgctgggatgcgcaggtctgatggactgccagtggccatcaagtacgtgtcgaaggaccggacccccgagcgactgaaagttgatggtcagggtcggctgccgctggaggtggcattgatgacccgtgtcacgtcagctcctgcctgccccagtgtcctgcagctgctggactggtttgaccgtcccaggcgctacatcctgatcctggagcgaccggatccttgccaagatctccagagcttctgtgaggagaacggctgtctggatgagcgtcttgcaaagaaagtgctggtgcagctgattgcggccctaaaacactgcgagagccgcggcgtcctgcaccgggacgtcaaaccagaaaacctcctgatctccacagagtcccaggacatcaagctgctggacttcggctgtggagatctgctgaagcactcggcctacaaatactttgcaggcactcctgcatacGCTCCTCCTGA

Function


symbol description
pimr42 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097037

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00063719 True 705 mRNA 0.58 5 16893171 16894312

Neighbor


gene id symbol gene type direction distance location
XLOC_032729 BX664705.3 coding downstream 21768 16871306 ~ 16871403 (-)
XLOC_032728 pimr41 coding downstream 24337 16867518 ~ 16868834 (-)
XLOC_032727 BX664705.1 coding downstream 36584 16854742 ~ 16856587 (-)
XLOC_032726 NA coding downstream 52613 16839853 ~ 16840558 (-)
XLOC_032725 NA coding downstream 54701 16838092 ~ 16838470 (-)
XLOC_032731 BX649628.3 coding upstream 2666 16896978 ~ 16897074 (-)
XLOC_032732 NA coding upstream 22081 16916393 ~ 16917663 (-)
XLOC_032733 NA coding upstream 24076 16918388 ~ 16919504 (-)
XLOC_032734 NA coding upstream 31526 16925838 ~ 16926234 (-)
XLOC_032735 NA coding upstream 33223 16927535 ~ 16927937 (-)
XLOC_032724 NA non-coding downstream 61687 16827918 ~ 16831484 (-)

Expression



Co-expression Network