Gene
RNA
| Item | Value |
|---|---|
| gene id | G1360243 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 28873053 ~ 28873278 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1554678 | True | 226 | lncRNA | 0.43 | 1 | 28873053 | 28873278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-214e3.5 | LOC106579413 | coding | upstream | 15252 | 28833364 ~ 28857801 (+) |
| LOC110492866 | LOC106521360 | coding | upstream | 265152 | 28579369 ~ 28607901 (+) |
| nif3l1 | nif3l1 | coding | upstream | 585245 | 28278657 ~ 28287808 (+) |
| cabp5a | LOC106579440 | coding | upstream | 607031 | 28260283 ~ 28266022 (+) |
| pagr1 | pagr1 | coding | upstream | 791682 | 28049066 ~ 28081371 (+) |
| nrg3b | LOC106579414 | coding | downstream | 51539 | 28924817 ~ 29353460 (+) |
| LOC110491795 | LOC106579416 | coding | downstream | 551063 | 29424341 ~ 29480114 (+) |
| irf3 | irf-3 | coding | downstream | 608366 | 29481644 ~ 29492902 (+) |
| LOC110491796 | NA | coding | downstream | 630131 | 29503409 ~ 29511609 (+) |
| LOC110491797 | LOC106579418 | coding | downstream | 660764 | 29534042 ~ 29629011 (+) |
| G1360238 | NA | non-coding | upstream | 7614 | 28864709 ~ 28865439 (+) |
| G1360236 | NA | non-coding | upstream | 20901 | 28851919 ~ 28852152 (+) |
| G1360235 | NA | non-coding | upstream | 22809 | 28849588 ~ 28850244 (+) |
| G1360233 | NA | non-coding | upstream | 23799 | 28848645 ~ 28849254 (+) |
| G1360245 | NA | non-coding | downstream | 5036 | 28878314 ~ 28878528 (+) |
| G1360248 | NA | non-coding | downstream | 8276 | 28881554 ~ 28881868 (+) |
| G1360249 | NA | non-coding | downstream | 9412 | 28882690 ~ 28883403 (+) |
| G1360251 | NA | non-coding | downstream | 11547 | 28884825 ~ 28930929 (+) |
| G1360256 | NA | non-coding | downstream | 18787 | 28892065 ~ 28897416 (+) |
| G1358698 | kif22 | other | upstream | 825663 | 28046682 ~ 28047390 (+) |
| LOC110491776 | LOC106579398 | other | upstream | 927212 | 27902972 ~ 27986259 (+) |
| LOC110491768 | LOC106579066 | other | upstream | 1295961 | 27561141 ~ 27595350 (+) |
| G1358292 | NA | other | upstream | 1540778 | 27329311 ~ 27332275 (+) |
| mpp3b | LOC106579097 | other | upstream | 2558252 | 26283071 ~ 26314809 (+) |
| G1361207 | NA | other | downstream | 929376 | 29802654 ~ 29804368 (+) |
| G1361671 | NA | other | downstream | 1070163 | 29943441 ~ 29943756 (+) |
| LOC110492869 | LOC106599969 | other | downstream | 1830369 | 30700999 ~ 30704172 (+) |
| G1362902 | fgfr2 | other | downstream | 2081331 | 30954609 ~ 30955975 (+) |
| G1363401 | NA | other | downstream | 2361215 | 31234493 ~ 31235386 (+) |
