G1360245


Basic Information

Item Value
gene id G1360245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 28878314 ~ 28878528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1554680
CGTGTGGACACTGCCATCCAATGACCACAGCAAGAGAGAGAATCTGCAGCAGCTAGATTGATGCCTACTGGGGTTTGGTGGAGGACCTTTCCCCAAGCCAGGACATCTCCCGTCTGACCCTGCATCCAGGTTTTGAGCCATCTTGCCTCAACCCATTTGTGCTGGGAATTGCATACATGGTcgtcagacaggaacacagaccaCTCCATGTCATT

Function

NR:

description
PREDICTED: P2X purinoceptor 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1554680 True 215 lncRNA 0.53 1 28878314 28878528

Neighbor

gene id symbol gene type direction distance location
si:ch211-214e3.5 LOC106579413 coding upstream 20513 28833364 ~ 28857801 (+)
LOC110492866 LOC106521360 coding upstream 270413 28579369 ~ 28607901 (+)
nif3l1 nif3l1 coding upstream 590506 28278657 ~ 28287808 (+)
cabp5a LOC106579440 coding upstream 612292 28260283 ~ 28266022 (+)
pagr1 pagr1 coding upstream 796943 28049066 ~ 28081371 (+)
nrg3b LOC106579414 coding downstream 46289 28924817 ~ 29353460 (+)
LOC110491795 LOC106579416 coding downstream 545813 29424341 ~ 29480114 (+)
irf3 irf-3 coding downstream 603116 29481644 ~ 29492902 (+)
LOC110491796 NA coding downstream 624881 29503409 ~ 29511609 (+)
LOC110491797 LOC106579418 coding downstream 655514 29534042 ~ 29629011 (+)
G1360243 NA non-coding upstream 5036 28873053 ~ 28873278 (+)
G1360238 NA non-coding upstream 12875 28864709 ~ 28865439 (+)
G1360236 NA non-coding upstream 26162 28851919 ~ 28852152 (+)
G1360235 NA non-coding upstream 28070 28849588 ~ 28850244 (+)
G1360233 NA non-coding upstream 29060 28848645 ~ 28849254 (+)
G1360248 NA non-coding downstream 3026 28881554 ~ 28881868 (+)
G1360249 NA non-coding downstream 4162 28882690 ~ 28883403 (+)
G1360251 NA non-coding downstream 6297 28884825 ~ 28930929 (+)
G1360256 NA non-coding downstream 13537 28892065 ~ 28897416 (+)
G1360336 NA non-coding downstream 126825 29005353 ~ 29019596 (+)
G1358698 kif22 other upstream 830924 28046682 ~ 28047390 (+)
LOC110491776 LOC106579398 other upstream 932473 27902972 ~ 27986259 (+)
LOC110491768 LOC106579066 other upstream 1301222 27561141 ~ 27595350 (+)
G1358292 NA other upstream 1546039 27329311 ~ 27332275 (+)
mpp3b LOC106579097 other upstream 2563513 26283071 ~ 26314809 (+)
G1361207 NA other downstream 924126 29802654 ~ 29804368 (+)
G1361671 NA other downstream 1064913 29943441 ~ 29943756 (+)
LOC110492869 LOC106599969 other downstream 1825119 30700999 ~ 30704172 (+)
G1362902 fgfr2 other downstream 2076081 30954609 ~ 30955975 (+)
G1363401 NA other downstream 2355965 31234493 ~ 31235386 (+)

Expression


Co-expression Network