XLOC_032732


Basic Information

Item Value
gene id XLOC_032732
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 16916393 ~ 16917663 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065115
CCTGGAGCTCGGCAAAgaggtagaactgcttgaacagactgaaaAATGGAGTTAGTTTCCAAAGAAATTTATTGAGATTAATTAtagacctgatatctttctctttggcagattTGTACGGAGCATGTGGAAAAACAGGGAAACACACCTCAGTAATCACAAGTGCATCATAATAAATTAGGTacagccttacatttttaagttgaatcaaattaacttcatcaaacattttaatttacatatttatattttcacaGAGTGATAGTCGGGTATTTTCtttggatggacggacggacgaacggatAGATAGTATTGAACAAGCAGGTAGAgctctgttgatgttttctttgtcttttacagagtgGAGTAGAGAATTTAGGGAATCACATCTCAGCAATGATAAGAAACTGCTGGTCAGGTATCACCTATCACCGAAAGATGTTTAAGAGGAAGGGGGGCGGTGGTGGGCTTGAGCTGGGCTCAGACTATAGGAGTTTTAAAAACCTAACCGATAATGAAATCTGGTTGCTGTGAACACATGAGGAGAATCTTTGGCAAATTTATTAGCCCACCTCAAATCTTAAATGTGTGCAAagtacaaaatatgaaaactgcgCCACAGCACACAAGATATTAAGGTTATCCTGACCGATGGAGCACATCACTCTCTTTGTCAAAAATTAcgctttttttttactaatattagATTATTAAATTATGCGGTGGTTCGGTTCTGGGTTTTTCGGGGTCGACAGCTAATTCTCGACTCTTAATTTTGGAGTCGGTGGAATCGGCTCAAGAATCAACACCTTTTACATTCACTTAAAATAGCGCAAGGATTAAACATGCTGTATCATATCGTTCTTTATACAAGCAGTTCTCCTGTGGTcagacaaaatcagcattttaaatcatctgcagtcaaaataaaataataatcagcctatactttttttaatttagaaaattaaATTGCAATCTTTGAgacagaaagttaaaacctcaatttattatcaaaatatttaatgaaaagatGTGTAGCAGCAGttcaataacaaattaaaaaacaccCCAATTGAGCCCAAACAACGcttaaataaaaatcatgaaataCCCTTAATATCttcttaatataaatgtttgataCATGAATACAGAGTATGAGTGAACAAAATAATCTGGTGTAGTGAACAGTCTGAGGTTGTTTAGTACTATATTTGTTTTAAAGGCAACAGATGCTCtaactcaggggtgtccaaactcggtcctgg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065115 True 1271 lncRNA 0.36 1 16916393 16917663

Neighbor

gene id symbol gene type direction distance location
XLOC_032731 BX649628.3 coding downstream 19319 16896978 ~ 16897074 (-)
XLOC_032730 pimr42 coding downstream 22081 16893171 ~ 16894312 (-)
XLOC_032729 BX664705.3 coding downstream 44990 16871306 ~ 16871403 (-)
XLOC_032728 pimr41 coding downstream 47559 16867518 ~ 16868834 (-)
XLOC_032727 BX664705.1 coding downstream 59806 16854742 ~ 16856587 (-)
XLOC_032733 NA coding upstream 725 16918388 ~ 16919504 (-)
XLOC_032734 NA coding upstream 8175 16925838 ~ 16926234 (-)
XLOC_032735 NA coding upstream 9872 16927535 ~ 16927937 (-)
XLOC_032736 pimr30 coding upstream 29061 16946724 ~ 16948040 (-)
XLOC_032737 BX649628.2 coding upstream 32832 16950495 ~ 16950592 (-)
XLOC_032726 NA non-coding downstream 75835 16839853 ~ 16840558 (-)
XLOC_032725 NA non-coding downstream 77923 16838092 ~ 16838470 (-)
XLOC_032739 BX649628.4 non-coding upstream 65926 16983589 ~ 16983686 (-)

Expression


Co-expression Network