G1360950


Basic Information

Item Value
gene id G1360950
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 29367836 ~ 29368083 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1555417
ctacgtttctattcaagcgtcgatcgacatggtaatggctctatagtattggaaaaaagttttaaaaaactgAACCTCCATTACATCGTGATGTGTCATGCCGTAACGTACAGCAATCATAAAgaaactatttctgtcttacaatctctctccaccaggtgtagcacttctctcatcgtttaaaaacaagaaatggacagtgacgggagTAAggaagggatacctagtcattttttgcgtcatcactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1555417 True 248 lncRNA 0.40 1 29367836 29368083

Neighbor

gene id symbol gene type direction distance location
nrg3b LOC106579414 coding upstream 14376 28924817 ~ 29353460 (+)
si:ch211-214e3.5 LOC106579413 coding upstream 510035 28833364 ~ 28857801 (+)
LOC110492866 LOC106521360 coding upstream 759935 28579369 ~ 28607901 (+)
nif3l1 nif3l1 coding upstream 1080028 28278657 ~ 28287808 (+)
cabp5a LOC106579440 coding upstream 1101814 28260283 ~ 28266022 (+)
LOC110491795 LOC106579416 coding downstream 56258 29424341 ~ 29480114 (+)
irf3 irf-3 coding downstream 113561 29481644 ~ 29492902 (+)
LOC110491796 NA coding downstream 135326 29503409 ~ 29511609 (+)
LOC110491797 LOC106579418 coding downstream 165959 29534042 ~ 29629011 (+)
LOC110491799 LOC106578370 coding downstream 346195 29714278 ~ 29727319 (+)
G1360336 NA non-coding upstream 348240 29005353 ~ 29019596 (+)
G1360251 NA non-coding upstream 436907 28884825 ~ 28930929 (+)
G1360256 NA non-coding upstream 470420 28892065 ~ 28897416 (+)
G1360249 NA non-coding upstream 484433 28882690 ~ 28883403 (+)
G1360248 NA non-coding upstream 485968 28881554 ~ 28881868 (+)
G1360967 NA non-coding downstream 13555 29381638 ~ 29381842 (+)
G1360978 NA non-coding downstream 21228 29389311 ~ 29389598 (+)
G1360998 NA non-coding downstream 40465 29408548 ~ 29408806 (+)
G1361033 NA non-coding downstream 147369 29515452 ~ 29515694 (+)
G1361046 NA non-coding downstream 261065 29629148 ~ 29650224 (+)
G1358698 kif22 other upstream 1320446 28046682 ~ 28047390 (+)
LOC110491776 LOC106579398 other upstream 1421995 27902972 ~ 27986259 (+)
LOC110491768 LOC106579066 other upstream 1790744 27561141 ~ 27595350 (+)
G1358292 NA other upstream 2035561 27329311 ~ 27332275 (+)
mpp3b LOC106579097 other upstream 3053035 26283071 ~ 26314809 (+)
G1361207 NA other downstream 434571 29802654 ~ 29804368 (+)
G1361671 NA other downstream 575358 29943441 ~ 29943756 (+)
LOC110492869 LOC106599969 other downstream 1335564 30700999 ~ 30704172 (+)
G1362902 fgfr2 other downstream 1586526 30954609 ~ 30955975 (+)
G1363401 NA other downstream 1866410 31234493 ~ 31235386 (+)

Expression


Co-expression Network